EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AJ_G0026098 (Gene tree)
Gene ID: -
Gene Symbol: Celf1
Alias: 1600010O03Rik|AA407467|Brunol2|CUG-BP|CUG-BP1|CUGBP|Cugbp|Cugbp1|D2Wsu101e|HNAB50|NAB50
Full Name: CUGBP%2C Elav-like family member 1
Gene Type: protein_coding
Species: Mus_musculus_aj
Status: putative
Strand: Plus strand
Length: 78730 bases
Position: chr2:88546678-88625407
Accession: 1342295
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0056036	RRM_1	PF00076.22	4.1e-52	1	3
MGP_AJ_P0056036	RRM_1	PF00076.22	4.1e-52	2	3
MGP_AJ_P0056036	RRM_1	PF00076.22	4.1e-52	3	3
MGP_AJ_P0056030	RRM_1	PF00076.22	4.2e-52	1	3
MGP_AJ_P0056030	RRM_1	PF00076.22	4.2e-52	2	3
MGP_AJ_P0056030	RRM_1	PF00076.22	4.2e-52	3	3
MGP_AJ_P0056035	RRM_1	PF00076.22	5.2e-52	1	3
MGP_AJ_P0056035	RRM_1	PF00076.22	5.2e-52	2	3
MGP_AJ_P0056035	RRM_1	PF00076.22	5.2e-52	3	3
MGP_AJ_P0056033	RRM_1	PF00076.22	6.7e-52	1	3
MGP_AJ_P0056033	RRM_1	PF00076.22	6.7e-52	2	3
MGP_AJ_P0056033	RRM_1	PF00076.22	6.7e-52	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0056029	-	350	-	-	- (aa)	-	-
MGP_AJ_T0056034	-	271	-	-	- (aa)	-	-
MGP_AJ_T0056035	-	7577	-	MGP_AJ_P0056035	513 (aa)	-	-
MGP_AJ_T0056036	-	4430	-	MGP_AJ_P0056036	483 (aa)	-	-
MGP_AJ_T0056037	-	486	-	-	- (aa)	-	-
MGP_AJ_T0056030	-	7849	-	MGP_AJ_P0056030	487 (aa)	-	-
MGP_AJ_T0056031	-	426	-	-	- (aa)	-	-
MGP_AJ_T0056032	-	478	-	-	- (aa)	-	-
MGP_AJ_T0056033	-	7029	-	MGP_AJ_P0056033	543 (aa)	-	-

Gene Model

Click here to download MGP_AJ_G0026098's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AJ_G0026098's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0026098	Celf1	100	80.082	MGP_AJ_G0025309	Celf2	100	88.060
MGP_AJ_G0026098	Celf1	98	44.650	MGP_AJ_G0017538	Celf5	93	56.322
MGP_AJ_G0026098	Celf1	100	45.200	MGP_AJ_G0024174	Celf4	100	42.430
MGP_AJ_G0026098	Celf1	53	43.421	MGP_AJ_G0035381	Rbms3	68	43.421
MGP_AJ_G0026098	Celf1	98	45.135	MGP_AJ_G0034883	Celf6	91	45.549
MGP_AJ_G0026098	Celf1	62	40.741	MGP_AJ_G0028539	Elavl4	78	40.741
MGP_AJ_G0026098	Celf1	97	43.320	MGP_AJ_G0027512	Celf3	99	43.830
MGP_AJ_G0026098	Celf1	52	35.526	MGP_AJ_G0023107	Pabpc6	53	35.526
MGP_AJ_G0026098	Celf1	57	43.590	MGP_AJ_G0034452	Elavl3	71	42.391
MGP_AJ_G0026098	Celf1	61	45.679	MGP_AJ_G0033314	Elavl1	83	45.679
MGP_AJ_G0026098	Celf1	69	41.975	MGP_AJ_G0028407	Elavl2	85	41.975