EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AJ_G0026538 (Gene tree)
Gene ID: -
Gene Symbol: Snrpb2
Alias: 2810052G09Rik
Full Name: U2 small nuclear ribonucleoprotein B
Gene Type: protein_coding
Species: Mus_musculus_aj
Status: putative
Strand: Plus strand
Length: 9825 bases
Position: chr2:141108143-141117967
Accession: 104805
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0058021	RRM_5	PF13893.6	8.4e-07	1	2
MGP_AJ_P0058021	RRM_5	PF13893.6	8.4e-07	2	2
MGP_AJ_P0058021	RRM_1	PF00076.22	2.9e-25	1	2
MGP_AJ_P0058021	RRM_1	PF00076.22	2.9e-25	2	2
MGP_AJ_P0058023	RRM_1	PF00076.22	1.9e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0058025	-	1827	-	-	- (aa)	-	-
MGP_AJ_T0058024	-	594	-	-	- (aa)	-	-
MGP_AJ_T0058021	-	2061	-	MGP_AJ_P0058021	225 (aa)	-	Q9CQI7
MGP_AJ_T0058023	-	636	-	MGP_AJ_P0058023	143 (aa)	-	-
MGP_AJ_T0058022	-	686	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_AJ_G0026538's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AJ_G0026538's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0026538	Snrpb2	99	63.121	MGP_AJ_G0031880	Snrpa	97	55.235
MGP_AJ_G0026538	Snrpb2	99	54.861	MGP_AJ_G0023177	Gm5145	97	52.347