EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AJ_G0026574 (Gene tree)
Gene ID: -
Gene Symbol: Gzf1
Alias: 8430437G08Rik|Zfp336|mGZF1
Full Name: GDNF-inducible zinc finger protein 1
Gene Type: protein_coding
Species: Mus_musculus_aj
Status: putative
Strand: Plus strand
Length: 11928 bases
Position: chr2:146806685-146818612
Accession: 1921783
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0058168	zf-C2H2	PF00096.26	3.1e-34	1	6
MGP_AJ_P0058168	zf-C2H2	PF00096.26	3.1e-34	2	6
MGP_AJ_P0058168	zf-C2H2	PF00096.26	3.1e-34	3	6
MGP_AJ_P0058168	zf-C2H2	PF00096.26	3.1e-34	4	6
MGP_AJ_P0058168	zf-C2H2	PF00096.26	3.1e-34	5	6
MGP_AJ_P0058168	zf-C2H2	PF00096.26	3.1e-34	6	6
MGP_AJ_P0058168	zf-met	PF12874.7	6.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0058168	-	4232	XM_006500304	MGP_AJ_P0058168	706 (aa)	XP_006500367	Q4VBD9
MGP_AJ_T0058169	-	701	-	MGP_AJ_P0058169	146 (aa)	-	-
MGP_AJ_T0058170	-	734	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_AJ_G0026574's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AJ_G0026574's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0026574	Gzf1	66	44.103	MGP_AJ_G0029473	Zbtb49	62	46.479
MGP_AJ_G0026574	Gzf1	83	37.118	MGP_AJ_G0029008	Zbtb17	78	39.568
MGP_AJ_G0026574	Gzf1	60	41.176	MGP_AJ_G0020671	Zfp748	82	41.176
MGP_AJ_G0026574	Gzf1	64	37.349	MGP_AJ_G0035429	Zfp651	51	37.349
MGP_AJ_G0026574	Gzf1	51	46.193	MGP_AJ_G0027082	Mynn	64	37.415
MGP_AJ_G0026574	Gzf1	84	34.286	MGP_AJ_G0016535	Zbtb41	54	34.286