EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AJ_G0026691 (Gene tree)
Gene ID: -
Gene Symbol: Raly
Alias: AI663842|Merc
Full Name: hnRNP-associated with lethal yellow
Gene Type: protein_coding
Species: Mus_musculus_aj
Status: putative
Strand: Plus strand
Length: 79294 bases
Position: chr2:153202804-153282097
Accession: 97850
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0058540	RRM_1	PF00076.22	1.8e-12	1	1
MGP_AJ_P0058538	RRM_1	PF00076.22	3.8e-12	1	1
MGP_AJ_P0058537	RRM_1	PF00076.22	7.1e-12	1	1
MGP_AJ_P0058542	RRM_1	PF00076.22	7.1e-12	1	1
MGP_AJ_P0058543	RRM_1	PF00076.22	7.5e-12	1	1
MGP_AJ_P0058539	RRM_1	PF00076.22	8e-12	1	1
MGP_AJ_P0058541	RRM_1	PF00076.22	8e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0058542	-	1747	-	MGP_AJ_P0058542	296 (aa)	-	-
MGP_AJ_T0058543	-	1100	-	MGP_AJ_P0058543	298 (aa)	-	-
MGP_AJ_T0058540	-	546	-	MGP_AJ_P0058540	141 (aa)	-	-
MGP_AJ_T0058541	-	1802	-	MGP_AJ_P0058541	312 (aa)	-	-
MGP_AJ_T0058546	-	337	-	-	- (aa)	-	-
MGP_AJ_T0058544	-	1574	-	-	- (aa)	-	-
MGP_AJ_T0058545	-	402	-	-	- (aa)	-	-
MGP_AJ_T0058539	-	1759	-	MGP_AJ_P0058539	312 (aa)	-	-
MGP_AJ_T0058538	-	851	-	MGP_AJ_P0058538	211 (aa)	-	-
MGP_AJ_T0058537	-	1709	XM_006499013	MGP_AJ_P0058537	296 (aa)	XP_006499076	Q64012

Gene Model

Click here to download MGP_AJ_G0026691's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AJ_G0026691's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0026691	Raly	54	35.526	MGP_AJ_G0026779	Srsf6	56	35.526
MGP_AJ_G0026691	Raly	72	74.757	MGP_AJ_G0021247	Hnrnpc	72	52.814
MGP_AJ_G0026691	Raly	51	32.500	MGP_AJ_G0035731	Rbmx	77	32.500
MGP_AJ_G0026691	Raly	52	32.099	MGP_AJ_G0033788	-	59	30.693