EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AJ_G0026873 (Gene tree)
Gene ID: -
Gene Symbol: Ddx27
Alias: C86129
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 27
Gene Type: protein_coding
Species: Mus_musculus_aj
Status: putative
Strand: Plus strand
Length: 20140 bases
Position: chr2:165619359-165639498
Accession: 2385884
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0059407	ResIII	PF04851.15	1.6e-06	1	1
MGP_AJ_P0059407	DEAD	PF00270.29	7.2e-45	1	1
MGP_AJ_P0059408	DEAD	PF00270.29	2.4e-18	1	1
MGP_AJ_P0059409	DEAD	PF00270.29	6e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0059407	-	2714	XM_006499422	MGP_AJ_P0059407	760 (aa)	XP_006499485	Q921N6
MGP_AJ_T0059412	-	708	-	-	- (aa)	-	-
MGP_AJ_T0059411	-	649	-	-	- (aa)	-	-
MGP_AJ_T0059410	-	264	-	-	- (aa)	-	-
MGP_AJ_T0059408	-	2151	-	MGP_AJ_P0059408	292 (aa)	-	-
MGP_AJ_T0059409	-	955	-	MGP_AJ_P0059409	310 (aa)	-	-

Gene Model

Click here to download MGP_AJ_G0026873's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AJ_G0026873's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0026873	Ddx27	52	34.129	MGP_AJ_G0017281	Ddx50	64	31.078
MGP_AJ_G0026873	Ddx27	51	35.938	MGP_AJ_G0020005	Ddx24	56	35.938
MGP_AJ_G0026873	Ddx27	53	38.221	MGP_AJ_G0016395	Ddx18	61	38.462
MGP_AJ_G0026873	Ddx27	59	33.696	MGP_AJ_G0033682	Ddx49	97	38.177
MGP_AJ_G0026873	Ddx27	53	31.019	MGP_AJ_G0017991	Ddx56	98	33.065
MGP_AJ_G0026873	Ddx27	56	32.558	MGP_AJ_G0022038	Ddx17	56	33.880