EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AJ_G0026986 (Gene tree)
Gene ID: -
Gene Symbol: Arfrp1
Alias: 1500006I01Rik|AI480700
Full Name: ADP-ribosylation factor related protein 1
Gene Type: protein_coding
Species: Mus_musculus_aj
Status: putative
Strand: Minus strand
Length: 8008 bases
Position: chr2:180209463-180217470
Accession: 1923938
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0059894	MMR_HSR1	PF01926.23	2.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0059893	-	1087	-	-	- (aa)	-	-
MGP_AJ_T0059892	-	1822	-	-	- (aa)	-	-
MGP_AJ_T0059891	-	2179	-	-	- (aa)	-	-
MGP_AJ_T0059890	-	2318	XM_011239965	MGP_AJ_P0059890	121 (aa)	XP_011238267	Q8BXL7
MGP_AJ_T0059897	-	662	-	MGP_AJ_P0059897	62 (aa)	-	-
MGP_AJ_T0059896	-	748	-	-	- (aa)	-	-
MGP_AJ_T0059895	-	835	-	-	- (aa)	-	-
MGP_AJ_T0059894	-	729	-	MGP_AJ_P0059894	201 (aa)	-	-
MGP_AJ_T0059899	-	555	-	-	- (aa)	-	-
MGP_AJ_T0059898	-	434	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_AJ_G0026986's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AJ_G0026986's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0026986	Arfrp1	93	38.793	MGP_AJ_G0018362	Arf1	96	33.871
MGP_AJ_G0026986	Arfrp1	87	32.222	MGP_AJ_G0019178	Arl4d	85	32.222
MGP_AJ_G0026986	Arfrp1	92	40.000	MGP_AJ_G0025187	Arl3	96	40.000
MGP_AJ_G0026986	Arfrp1	91	38.182	MGP_AJ_G0024717	Arl2	97	35.106
MGP_AJ_G0026986	Arfrp1	85	36.416	MGP_AJ_G0017610	Arl1	98	33.862
MGP_AJ_G0026986	Arfrp1	84	40.196	MGP_AJ_G0025344	Arl5b	92	37.126
MGP_AJ_G0026986	Arfrp1	93	31.304	MGP_AJ_G0031071	Arl8b	74	31.724
MGP_AJ_G0026986	Arfrp1	93	38.938	MGP_AJ_G0025710	Arl5a	97	38.587
MGP_AJ_G0026986	Arfrp1	85	34.286	MGP_AJ_G0016269	Arl4c	86	34.286
MGP_AJ_G0026986	Arfrp1	91	40.000	MGP_AJ_G0019665	Arl4a	90	34.896
MGP_AJ_G0026986	Arfrp1	93	40.708	MGP_AJ_G0019014	Arl5c	96	37.705
MGP_AJ_G0026986	Arfrp1	71	30.070	MGP_AJ_G0016500	Arl8a	73	30.070
MGP_AJ_G0026986	Arfrp1	93	33.929	MGP_AJ_G0022900	Arl6	92	30.387
MGP_AJ_G0026986	Arfrp1	84	36.538	MGP_AJ_G0027256	Arl14	83	35.503
MGP_AJ_G0026986	Arfrp1	87	35.185	MGP_AJ_G0029939	Rab35	59	32.576
MGP_AJ_G0026986	Arfrp1	93	37.931	MGP_AJ_G0022267	Arf3	96	33.333
MGP_AJ_G0026986	Arfrp1	93	38.793	MGP_AJ_G0019239	Arf2	96	33.333
MGP_AJ_G0026986	Arfrp1	87	37.273	MGP_AJ_G0021398	Arl11	94	34.659