EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_AJ_G0027108 (Gene tree)
Gene ID
-
Gene Symbol
Fxr1
Alias
1110050J02Rik|9530073J07Rik|AI851072|Fxr1h|Fxr1p
Full Name
fragile X mental retardation gene 1%2C autosomal homolog
Gene Type
protein_coding
Species
Mus_musculus_aj
Status
putative
Strand
Plus strand
Length
50759 bases
Position
chr3:31179153-31229911
Accession
104860
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_AJ_P0060480KH_1PF00013.299e-1712
MGP_AJ_P0060480KH_1PF00013.299e-1722
MGP_AJ_P0060479KH_1PF00013.299.2e-1712
MGP_AJ_P0060479KH_1PF00013.299.2e-1722
MGP_AJ_P0060477KH_1PF00013.291.1e-1612
MGP_AJ_P0060477KH_1PF00013.291.1e-1622
MGP_AJ_P0060478KH_1PF00013.291.3e-1612
MGP_AJ_P0060478KH_1PF00013.291.3e-1622
MGP_AJ_P0060475KH_1PF00013.291.7e-1612
MGP_AJ_P0060475KH_1PF00013.291.7e-1622
MGP_AJ_P0060480AgenetPF05641.124.1e-1512
MGP_AJ_P0060480AgenetPF05641.124.1e-1522
MGP_AJ_P0060479AgenetPF05641.124.2e-1512
MGP_AJ_P0060479AgenetPF05641.124.2e-1522
MGP_AJ_P0060477AgenetPF05641.124.9e-1512
MGP_AJ_P0060477AgenetPF05641.124.9e-1522
MGP_AJ_P0060478AgenetPF05641.126.4e-1512
MGP_AJ_P0060478AgenetPF05641.126.4e-1522
MGP_AJ_P0060475AgenetPF05641.128.1e-1512
MGP_AJ_P0060475AgenetPF05641.128.1e-1522
MGP_AJ_P0060477FXMRP1_C_corePF12235.83.1e-4611
MGP_AJ_P0060475FXMRP1_C_corePF12235.84.1e-4611
MGP_AJ_P0060480FXMRP1_C_corePF12235.88.5e-2912
MGP_AJ_P0060480FXMRP1_C_corePF12235.88.5e-2922
MGP_AJ_P0060479FXMRP1_C_corePF12235.88.7e-2912
MGP_AJ_P0060479FXMRP1_C_corePF12235.88.7e-2922
MGP_AJ_P0060478FXMRP1_C_corePF12235.85.3e-2812
MGP_AJ_P0060478FXMRP1_C_corePF12235.85.3e-2822
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_AJ_T0060479-3014-MGP_AJ_P0060479539 (aa)--
MGP_AJ_T0060481-651--- (aa)--
MGP_AJ_T0060475-2459XM_006535400MGP_AJ_P0060475677 (aa)XP_006535463Q61584
MGP_AJ_T0060477-2127-MGP_AJ_P0060477568 (aa)--
MGP_AJ_T0060476-2158-MGP_AJ_P006047654 (aa)--
MGP_AJ_T0060480-1611-MGP_AJ_P0060480536 (aa)--
MGP_AJ_T0060478-2129-MGP_AJ_P0060478621 (aa)--
MGP_AJ_T0060482-646-MGP_AJ_P0060482132 (aa)--
MGP_AJ_T0060483-2488--- (aa)--
Gene Model
Click here to download MGP_AJ_G0027108's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_AJ_G0027108's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_AJ_G0027108Fxr18173.653MGP_AJ_G0035755Fmr18565.613
MGP_AJ_G0027108Fxr19966.490MGP_AJ_G0018510Fxr29862.737

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us