EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Description

Ensembl ID: MGP_AJ_G0027355 (Gene tree)
Gene ID: -
Gene Symbol: Smg5
Alias: BC024683|Est1b|Kiaa1089|mKIAA1089
Full Name: Smg-5 homolog%2C nonsense mediated mRNA decay factor (C. elegans)
Gene Type: protein_coding
Species: Mus_musculus_aj
Status: putative
Strand: Plus strand
Length: 26059 bases
Position: chr3:85493071-85519129
Accession: 2447364
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0061616	EST1	PF10374.9	1.4e-23	1	1
MGP_AJ_P0061616	EST1_DNA_bind	PF10373.9	3.8e-39	1	2
MGP_AJ_P0061616	EST1_DNA_bind	PF10373.9	3.8e-39	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0061618	-	751	-	-	- (aa)	-	-
MGP_AJ_T0061619	-	778	-	-	- (aa)	-	-
MGP_AJ_T0061616	-	4448	XM_006501343	MGP_AJ_P0061616	1017 (aa)	XP_006501406	Q6ZPY2
MGP_AJ_T0061617	-	3119	-	-	- (aa)	-	-
MGP_AJ_T0061623	-	833	-	-	- (aa)	-	-
MGP_AJ_T0061622	-	769	-	-	- (aa)	-	-
MGP_AJ_T0061621	-	830	-	-	- (aa)	-	-
MGP_AJ_T0061620	-	1010	-	MGP_AJ_P0061620	179 (aa)	-	-
MGP_AJ_T0061624	-	424	-	-	- (aa)	-	-

Gene Model

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Protein-Protein Interaction (PPI)

Clik here to download MGP_AJ_G0027355's network