EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AJ_G0027512 (Gene tree)
Gene ID: -
Gene Symbol: Celf3
Alias: 4930415M08Rik|BRUNOL1|CAGH4|ERDA4|Tnrc4
Full Name: CUGBP%2C Elav-like family member 3
Gene Type: protein_coding
Species: Mus_musculus_aj
Status: putative
Strand: Plus strand
Length: 13741 bases
Position: chr3:92166055-92179795
Accession: 1926034
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0062248	RRM_1	PF00076.22	9.3e-54	1	3
MGP_AJ_P0062248	RRM_1	PF00076.22	9.3e-54	2	3
MGP_AJ_P0062248	RRM_1	PF00076.22	9.3e-54	3	3
MGP_AJ_P0062247	RRM_1	PF00076.22	1.5e-53	1	3
MGP_AJ_P0062247	RRM_1	PF00076.22	1.5e-53	2	3
MGP_AJ_P0062247	RRM_1	PF00076.22	1.5e-53	3	3
MGP_AJ_P0062249	RRM_1	PF00076.22	2e-53	1	3
MGP_AJ_P0062249	RRM_1	PF00076.22	2e-53	2	3
MGP_AJ_P0062249	RRM_1	PF00076.22	2e-53	3	3
MGP_AJ_P0062254	RRM_1	PF00076.22	6.9e-16	1	1
MGP_AJ_P0062255	RRM_1	PF00076.22	1.1e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0062257	-	889	-	-	- (aa)	-	-
MGP_AJ_T0062256	-	3374	-	-	- (aa)	-	-
MGP_AJ_T0062246	-	329	XM_006502323	MGP_AJ_P0062246	31 (aa)	XP_006502386	Q8CIN6
MGP_AJ_T0062247	-	2749	-	MGP_AJ_P0062247	465 (aa)	-	-
MGP_AJ_T0062253	-	2937	-	-	- (aa)	-	-
MGP_AJ_T0062252	-	2446	-	-	- (aa)	-	-
MGP_AJ_T0062251	-	669	-	-	- (aa)	-	-
MGP_AJ_T0062250	-	1193	-	-	- (aa)	-	-
MGP_AJ_T0062255	-	726	-	MGP_AJ_P0062255	231 (aa)	-	-
MGP_AJ_T0062248	-	2356	-	MGP_AJ_P0062248	416 (aa)	-	-
MGP_AJ_T0062249	-	4095	-	MGP_AJ_P0062249	494 (aa)	-	-
MGP_AJ_T0062258	-	855	-	-	- (aa)	-	-
MGP_AJ_T0062254	-	779	-	MGP_AJ_P0062254	182 (aa)	-	-

Gene Model

Click here to download MGP_AJ_G0027512's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AJ_G0027512's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0027512	Celf3	98	35.632	MGP_AJ_G0033314	Elavl1	95	44.444
MGP_AJ_G0027512	Celf3	91	39.474	MGP_AJ_G0035381	Rbms3	76	39.474
MGP_AJ_G0027512	Celf3	61	40.741	MGP_AJ_G0028539	Elavl4	85	40.741
MGP_AJ_G0027512	Celf3	63	41.975	MGP_AJ_G0028407	Elavl2	76	41.975
MGP_AJ_G0027512	Celf3	77	37.805	MGP_AJ_G0030941	Tia1	93	38.667
MGP_AJ_G0027512	Celf3	90	55.801	MGP_AJ_G0025309	Celf2	94	83.333
MGP_AJ_G0027512	Celf3	67	32.857	MGP_AJ_G0026800	Pabpc1l	57	34.118
MGP_AJ_G0027512	Celf3	81	87.368	MGP_AJ_G0034883	Celf6	75	85.526
MGP_AJ_G0027512	Celf3	100	66.848	MGP_AJ_G0017538	Celf5	93	76.744
MGP_AJ_G0027512	Celf3	70	34.091	MGP_AJ_G0033065	Tial1	81	37.333
MGP_AJ_G0027512	Celf3	99	43.830	MGP_AJ_G0026098	Celf1	97	43.320
MGP_AJ_G0027512	Celf3	100	69.072	MGP_AJ_G0024174	Celf4	100	63.275
MGP_AJ_G0027512	Celf3	80	37.500	MGP_AJ_G0023107	Pabpc6	72	36.585
MGP_AJ_G0027512	Celf3	98	35.632	MGP_AJ_G0034452	Elavl3	89	34.940