EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AJ_G0027784 (Gene tree)
Gene ID: -
Gene Symbol: Ptbp2
Alias: Brptb|Nptb|Ptb2|brPTB|nPTB
Full Name: polypyrimidine tract binding protein 2
Gene Type: protein_coding
Species: Mus_musculus_aj
Status: putative
Strand: Minus strand
Length: 68333 bases
Position: chr3:117811368-117879700
Accession: 1860489
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0063477	RRM_5	PF13893.6	3.4e-53	1	3
MGP_AJ_P0063477	RRM_5	PF13893.6	3.4e-53	2	3
MGP_AJ_P0063477	RRM_5	PF13893.6	3.4e-53	3	3
MGP_AJ_P0063478	RRM_5	PF13893.6	4e-52	1	2
MGP_AJ_P0063478	RRM_5	PF13893.6	4e-52	2	2
MGP_AJ_P0063483	RRM_5	PF13893.6	3.4e-20	1	1
MGP_AJ_P0063478	RRM_1	PF00076.22	5.9e-33	1	3
MGP_AJ_P0063478	RRM_1	PF00076.22	5.9e-33	2	3
MGP_AJ_P0063478	RRM_1	PF00076.22	5.9e-33	3	3
MGP_AJ_P0063477	RRM_1	PF00076.22	2e-32	1	3
MGP_AJ_P0063477	RRM_1	PF00076.22	2e-32	2	3
MGP_AJ_P0063477	RRM_1	PF00076.22	2e-32	3	3
MGP_AJ_P0063485	RRM_1	PF00076.22	2.5e-10	1	1
MGP_AJ_P0063483	RRM_1	PF00076.22	0.00023	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0063489	-	389	-	MGP_AJ_P0063489	49 (aa)	-	-
MGP_AJ_T0063488	-	454	-	-	- (aa)	-	-
MGP_AJ_T0063486	-	654	-	-	- (aa)	-	-
MGP_AJ_T0063478	-	3774	-	MGP_AJ_P0063478	531 (aa)	-	-
MGP_AJ_T0063479	-	1598	-	MGP_AJ_P0063479	356 (aa)	-	-
MGP_AJ_T0063481	-	937	-	-	- (aa)	-	-
MGP_AJ_T0063480	-	576	-	MGP_AJ_P0063480	33 (aa)	-	-
MGP_AJ_T0063483	-	465	-	MGP_AJ_P0063483	155 (aa)	-	-
MGP_AJ_T0063482	-	491	-	-	- (aa)	-	-
MGP_AJ_T0063485	-	1742	-	MGP_AJ_P0063485	241 (aa)	-	-
MGP_AJ_T0063484	-	4047	-	-	- (aa)	-	-
MGP_AJ_T0063487	-	478	-	-	- (aa)	-	-
MGP_AJ_T0063477	-	3365	XM_006501731	MGP_AJ_P0063477	532 (aa)	XP_006501794	Q91Z31

Gene Model

Click here to download MGP_AJ_G0027784's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AJ_G0027784's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0027784	Ptbp2	77	30.645	MGP_AJ_G0031940	Hnrnpl	77	30.645
MGP_AJ_G0027784	Ptbp2	99	69.835	MGP_AJ_G0028297	Ptbp3	91	78.195
MGP_AJ_G0027784	Ptbp2	99	30.357	MGP_AJ_G0024012	Hnrnpll	57	30.000
MGP_AJ_G0027784	Ptbp2	100	72.903	MGP_AJ_G0017441	Ptbp1	100	73.048