EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AJ_G0027947 (Gene tree)
Gene ID: -
Gene Symbol: Fubp1
Alias: 9530027K12Rik|D3Ertd330e|FBP|Fubp|Fubp4
Full Name: far upstream element (FUSE) binding protein 1
Gene Type: protein_coding
Species: Mus_musculus_aj
Status: putative
Strand: Plus strand
Length: 26621 bases
Position: chr3:150403893-150430513
Accession: 1196294
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0064349	KH_1	PF00013.29	7.2e-70	1	4
MGP_AJ_P0064349	KH_1	PF00013.29	7.2e-70	2	4
MGP_AJ_P0064349	KH_1	PF00013.29	7.2e-70	3	4
MGP_AJ_P0064349	KH_1	PF00013.29	7.2e-70	4	4
MGP_AJ_P0064346	KH_1	PF00013.29	2.2e-69	1	4
MGP_AJ_P0064346	KH_1	PF00013.29	2.2e-69	2	4
MGP_AJ_P0064346	KH_1	PF00013.29	2.2e-69	3	4
MGP_AJ_P0064346	KH_1	PF00013.29	2.2e-69	4	4
MGP_AJ_P0064353	KH_1	PF00013.29	2.2e-69	1	4
MGP_AJ_P0064353	KH_1	PF00013.29	2.2e-69	2	4
MGP_AJ_P0064353	KH_1	PF00013.29	2.2e-69	3	4
MGP_AJ_P0064353	KH_1	PF00013.29	2.2e-69	4	4
MGP_AJ_P0064350	KH_1	PF00013.29	2.4e-69	1	4
MGP_AJ_P0064350	KH_1	PF00013.29	2.4e-69	2	4
MGP_AJ_P0064350	KH_1	PF00013.29	2.4e-69	3	4
MGP_AJ_P0064350	KH_1	PF00013.29	2.4e-69	4	4
MGP_AJ_P0064348	KH_1	PF00013.29	2.4e-69	1	4
MGP_AJ_P0064348	KH_1	PF00013.29	2.4e-69	2	4
MGP_AJ_P0064348	KH_1	PF00013.29	2.4e-69	3	4
MGP_AJ_P0064348	KH_1	PF00013.29	2.4e-69	4	4
MGP_AJ_P0064347	KH_1	PF00013.29	7.7e-38	1	2
MGP_AJ_P0064347	KH_1	PF00013.29	7.7e-38	2	2
MGP_AJ_P0064356	KH_1	PF00013.29	1.1e-16	1	1
MGP_AJ_P0064349	KH_2	PF07650.17	1.3e-22	1	2
MGP_AJ_P0064349	KH_2	PF07650.17	1.3e-22	2	2
MGP_AJ_P0064353	KH_2	PF07650.17	3.4e-22	1	2
MGP_AJ_P0064353	KH_2	PF07650.17	3.4e-22	2	2
MGP_AJ_P0064350	KH_2	PF07650.17	3.6e-22	1	2
MGP_AJ_P0064350	KH_2	PF07650.17	3.6e-22	2	2
MGP_AJ_P0064348	KH_2	PF07650.17	3.7e-22	1	2
MGP_AJ_P0064348	KH_2	PF07650.17	3.7e-22	2	2
MGP_AJ_P0064346	KH_2	PF07650.17	3.7e-22	1	2
MGP_AJ_P0064346	KH_2	PF07650.17	3.7e-22	2	2
MGP_AJ_P0064347	KH_2	PF07650.17	3.9e-10	1	1
MGP_AJ_P0064356	KH_2	PF07650.17	5.2e-06	1	1
MGP_AJ_P0064360	DUF1897	PF09005.10	1.7e-12	1	2
MGP_AJ_P0064360	DUF1897	PF09005.10	1.7e-12	2	2
MGP_AJ_P0064358	DUF1897	PF09005.10	2.1e-12	1	2
MGP_AJ_P0064358	DUF1897	PF09005.10	2.1e-12	2	2
MGP_AJ_P0064346	DUF1897	PF09005.10	2.5e-11	1	2
MGP_AJ_P0064346	DUF1897	PF09005.10	2.5e-11	2	2
MGP_AJ_P0064353	DUF1897	PF09005.10	2.5e-11	1	2
MGP_AJ_P0064353	DUF1897	PF09005.10	2.5e-11	2	2
MGP_AJ_P0064350	DUF1897	PF09005.10	2.6e-11	1	2
MGP_AJ_P0064350	DUF1897	PF09005.10	2.6e-11	2	2
MGP_AJ_P0064348	DUF1897	PF09005.10	2.6e-11	1	2
MGP_AJ_P0064348	DUF1897	PF09005.10	2.6e-11	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0064364	-	665	-	-	- (aa)	-	-
MGP_AJ_T0064354	-	4528	-	MGP_AJ_P0064354	643 (aa)	-	-
MGP_AJ_T0064355	-	432	-	-	- (aa)	-	-
MGP_AJ_T0064358	-	796	-	MGP_AJ_P0064358	141 (aa)	-	-
MGP_AJ_T0064359	-	800	-	MGP_AJ_P0064359	173 (aa)	-	-
MGP_AJ_T0064349	-	3166	-	MGP_AJ_P0064349	524 (aa)	-	-
MGP_AJ_T0064348	-	2555	-	MGP_AJ_P0064348	655 (aa)	-	-
MGP_AJ_T0064361	-	5099	-	-	- (aa)	-	-
MGP_AJ_T0064360	-	826	-	MGP_AJ_P0064360	156 (aa)	-	-
MGP_AJ_T0064363	-	4006	-	-	- (aa)	-	-
MGP_AJ_T0064362	-	424	-	-	- (aa)	-	-
MGP_AJ_T0064350	-	2529	-	MGP_AJ_P0064350	652 (aa)	-	-
MGP_AJ_T0064351	-	2095	-	MGP_AJ_P0064351	70 (aa)	-	-
MGP_AJ_T0064352	-	4866	-	MGP_AJ_P0064352	701 (aa)	-	-
MGP_AJ_T0064353	-	2377	-	MGP_AJ_P0064353	644 (aa)	-	-
MGP_AJ_T0064347	-	1043	-	MGP_AJ_P0064347	307 (aa)	-	-
MGP_AJ_T0064346	-	6543	XM_006501660	MGP_AJ_P0064346	643 (aa)	XP_006501723	Q91WJ8
MGP_AJ_T0064356	-	585	-	MGP_AJ_P0064356	149 (aa)	-	-
MGP_AJ_T0064357	-	512	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_AJ_G0027947's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AJ_G0027947's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0027947	Fubp1	96	64.410	MGP_AJ_G0023907	Khsrp	70	67.654
MGP_AJ_G0027947	Fubp1	50	36.364	MGP_AJ_G0019678	Nova1	57	36.364
MGP_AJ_G0027947	Fubp1	72	34.524	MGP_AJ_G0035211	Pcbp4	76	33.684
MGP_AJ_G0027947	Fubp1	53	34.615	MGP_AJ_G0020587	Hnrnpk	57	34.615
MGP_AJ_G0027947	Fubp1	94	59.208	MGP_AJ_G0025564	Fubp3	96	64.324
MGP_AJ_G0027947	Fubp1	61	36.765	MGP_AJ_G0031724	Nova2	53	36.765
MGP_AJ_G0027947	Fubp1	61	36.765	MGP_AJ_G0031725	Nova2	54	36.765
MGP_AJ_G0027947	Fubp1	71	33.019	MGP_AJ_G0017367	Pcbp3	66	31.250