EuRBPDB

Description

Ensembl ID: MGP_AJ_G0027998 (Gene tree)
Gene ID: -
Gene Symbol: Chd7
Alias: A730019I05Rik|Cycn|Cyn|Dz|Edy|Flo|GENA 47|GENA 60|Gena 52|Lda|Mt|Obt|Todo|WBE1|Whi|metis
Full Name: chromodomain helicase DNA binding protein 7
Gene Type: protein_coding
Species: Mus_musculus_aj
Status: putative
Strand: Plus strand
Length: 180571 bases
Position: chr4:5164481-5345051
Accession: 2444748
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0064662	ResIII	PF04851.15	4.5e-06	1	1
MGP_AJ_P0064663	ResIII	PF04851.15	4.5e-06	1	1
MGP_AJ_P0064662	BRK	PF07533.16	4.7e-37	1	2
MGP_AJ_P0064662	BRK	PF07533.16	4.7e-37	2	2
MGP_AJ_P0064663	BRK	PF07533.16	4.7e-37	1	2
MGP_AJ_P0064663	BRK	PF07533.16	4.7e-37	2	2
MGP_AJ_P0064665	BRK	PF07533.16	1.2e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0064664	-	458	-	MGP_AJ_P0064664	19 (aa)	-	-
MGP_AJ_T0064665	-	3464	-	MGP_AJ_P0064665	941 (aa)	-	-
MGP_AJ_T0064666	-	8958	-	MGP_AJ_P0064666	2985 (aa)	-	-
MGP_AJ_T0064667	-	741	-	-	- (aa)	-	-
MGP_AJ_T0064660	-	4953	-	-	- (aa)	-	-
MGP_AJ_T0064661	-	2381	-	MGP_AJ_P0064661	631 (aa)	-	-
MGP_AJ_T0064662	-	9445	-	MGP_AJ_P0064662	2986 (aa)	-	-
MGP_AJ_T0064663	-	10216	-	MGP_AJ_P0064663	2986 (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0027998	Chd7	72	64.905	MGP_AJ_G0026776	Chd6	84	72.837
MGP_AJ_G0027998	Chd7	94	54.400	MGP_AJ_G0033910	Chd9	83	69.649