EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AJ_G0028407 (Gene tree)
Gene ID: -
Gene Symbol: Elavl2
Alias: Hub|mel-N1
Full Name: ELAV (embryonic lethal%2C abnormal vision%2C Drosophila)-like 2 (Hu antigen B)
Gene Type: protein_coding
Species: Mus_musculus_aj
Status: putative
Strand: Minus strand
Length: 151199 bases
Position: chr4:88035829-88187027
Accession: 1100887
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0066366	RRM_5	PF13893.6	1.3e-12	1	2
MGP_AJ_P0066366	RRM_5	PF13893.6	1.3e-12	2	2
MGP_AJ_P0066368	RRM_5	PF13893.6	1.4e-12	1	2
MGP_AJ_P0066368	RRM_5	PF13893.6	1.4e-12	2	2
MGP_AJ_P0066365	RRM_5	PF13893.6	1.7e-12	1	2
MGP_AJ_P0066365	RRM_5	PF13893.6	1.7e-12	2	2
MGP_AJ_P0066367	RRM_5	PF13893.6	1.9e-12	1	2
MGP_AJ_P0066367	RRM_5	PF13893.6	1.9e-12	2	2
MGP_AJ_P0066371	RRM_5	PF13893.6	2.1e-12	1	2
MGP_AJ_P0066371	RRM_5	PF13893.6	2.1e-12	2	2
MGP_AJ_P0066370	RRM_5	PF13893.6	2.2e-12	1	2
MGP_AJ_P0066370	RRM_5	PF13893.6	2.2e-12	2	2
MGP_AJ_P0066366	RRM_1	PF00076.22	1.2e-66	1	3
MGP_AJ_P0066366	RRM_1	PF00076.22	1.2e-66	2	3
MGP_AJ_P0066366	RRM_1	PF00076.22	1.2e-66	3	3
MGP_AJ_P0066368	RRM_1	PF00076.22	1.4e-66	1	3
MGP_AJ_P0066368	RRM_1	PF00076.22	1.4e-66	2	3
MGP_AJ_P0066368	RRM_1	PF00076.22	1.4e-66	3	3
MGP_AJ_P0066365	RRM_1	PF00076.22	1.6e-66	1	3
MGP_AJ_P0066365	RRM_1	PF00076.22	1.6e-66	2	3
MGP_AJ_P0066365	RRM_1	PF00076.22	1.6e-66	3	3
MGP_AJ_P0066367	RRM_1	PF00076.22	1.7e-66	1	3
MGP_AJ_P0066367	RRM_1	PF00076.22	1.7e-66	2	3
MGP_AJ_P0066367	RRM_1	PF00076.22	1.7e-66	3	3
MGP_AJ_P0066370	RRM_1	PF00076.22	2e-66	1	3
MGP_AJ_P0066370	RRM_1	PF00076.22	2e-66	2	3
MGP_AJ_P0066370	RRM_1	PF00076.22	2e-66	3	3
MGP_AJ_P0066371	RRM_1	PF00076.22	2e-66	1	3
MGP_AJ_P0066371	RRM_1	PF00076.22	2e-66	2	3
MGP_AJ_P0066371	RRM_1	PF00076.22	2e-66	3	3
MGP_AJ_P0066373	RRM_1	PF00076.22	7.2e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0066375	-	511	-	MGP_AJ_P0066375	23 (aa)	-	-
MGP_AJ_T0066376	-	450	-	-	- (aa)	-	-
MGP_AJ_T0066374	-	408	-	MGP_AJ_P0066374	83 (aa)	-	-
MGP_AJ_T0066369	-	930	-	-	- (aa)	-	-
MGP_AJ_T0066368	-	3730	-	MGP_AJ_P0066368	360 (aa)	-	-
MGP_AJ_T0066367	-	3797	-	MGP_AJ_P0066367	376 (aa)	-	-
MGP_AJ_T0066366	-	3671	-	MGP_AJ_P0066366	347 (aa)	-	-
MGP_AJ_T0066365	-	3840	XM_006502778	MGP_AJ_P0066365	373 (aa)	XP_006502841	Q60899
MGP_AJ_T0066377	-	415	-	-	- (aa)	-	-
MGP_AJ_T0066370	-	1167	-	MGP_AJ_P0066370	388 (aa)	-	-
MGP_AJ_T0066371	-	1282	-	MGP_AJ_P0066371	389 (aa)	-	-
MGP_AJ_T0066372	-	3195	-	-	- (aa)	-	-
MGP_AJ_T0066373	-	425	-	MGP_AJ_P0066373	125 (aa)	-	-

Gene Model

Click here to download MGP_AJ_G0028407's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AJ_G0028407's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0028407	Elavl2	96	34.615	MGP_AJ_G0030941	Tia1	89	34.615
MGP_AJ_G0028407	Elavl2	64	37.500	MGP_AJ_G0017464	Cirbp	76	37.500
MGP_AJ_G0028407	Elavl2	59	33.784	MGP_AJ_G0027586	Rbm8a	58	32.353
MGP_AJ_G0028407	Elavl2	66	30.952	MGP_AJ_G0028827	Trnau1ap	98	30.952
MGP_AJ_G0028407	Elavl2	73	34.831	MGP_AJ_G0035731	Rbmx	86	34.831
MGP_AJ_G0028407	Elavl2	89	37.037	MGP_AJ_G0036025	Pabpc5	94	37.037
MGP_AJ_G0028407	Elavl2	58	31.169	MGP_AJ_G0029746	Hnrnpd	70	32.000
MGP_AJ_G0028407	Elavl2	100	89.751	MGP_AJ_G0028539	Elavl4	99	89.315
MGP_AJ_G0028407	Elavl2	85	41.975	MGP_AJ_G0026098	Celf1	69	41.975
MGP_AJ_G0028407	Elavl2	63	32.911	MGP_AJ_G0035518	Rbm3	82	38.710
MGP_AJ_G0028407	Elavl2	97	30.857	MGP_AJ_G0017538	Celf5	97	30.857
MGP_AJ_G0028407	Elavl2	69	34.524	MGP_AJ_G0033788	-	52	34.831
MGP_AJ_G0028407	Elavl2	100	79.292	MGP_AJ_G0034452	Elavl3	100	78.400
MGP_AJ_G0028407	Elavl2	59	33.784	MGP_AJ_G0016823	-	58	32.353
MGP_AJ_G0028407	Elavl2	76	41.975	MGP_AJ_G0027512	Celf3	63	41.975
MGP_AJ_G0028407	Elavl2	92	34.940	MGP_AJ_G0026800	Pabpc1l	64	34.940
MGP_AJ_G0028407	Elavl2	78	40.741	MGP_AJ_G0034883	Celf6	89	37.037
MGP_AJ_G0028407	Elavl2	89	76.375	MGP_AJ_G0033314	Elavl1	94	76.375
MGP_AJ_G0028407	Elavl2	67	35.714	MGP_AJ_G0030062	Snrnp35	60	37.500
MGP_AJ_G0028407	Elavl2	69	37.209	MGP_AJ_G0035381	Rbms3	83	37.222
MGP_AJ_G0028407	Elavl2	90	37.349	MGP_AJ_G0023107	Pabpc6	60	37.349
MGP_AJ_G0028407	Elavl2	89	36.145	MGP_AJ_G0024336	Pabpc2	59	36.145
MGP_AJ_G0028407	Elavl2	72	32.632	MGP_AJ_G0018892	Msi2	70	31.250
MGP_AJ_G0028407	Elavl2	83	39.506	MGP_AJ_G0025309	Celf2	87	33.333
MGP_AJ_G0028407	Elavl2	93	34.615	MGP_AJ_G0033065	Tial1	72	34.615
MGP_AJ_G0028407	Elavl2	89	37.349	MGP_AJ_G0021757	Pabpc1	58	37.349
MGP_AJ_G0028407	Elavl2	89	34.940	MGP_AJ_G0027150	Pabpc4l	96	34.940
MGP_AJ_G0028407	Elavl2	88	39.506	MGP_AJ_G0024174	Celf4	91	37.037