EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AJ_G0028518 (Gene tree)
Gene ID: -
Gene Symbol: Zcchc11
Alias: 6030404K05Rik|9230115F04Rik|Kiaa0191|PPAPD3|Tut4|mKIAA0191
Full Name: zinc finger%2C CCHC domain containing 11
Gene Type: protein_coding
Species: Mus_musculus_aj
Status: putative
Strand: Plus strand
Length: 100027 bases
Position: chr4:105268672-105368698
Accession: 2445126
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0066898	zf-CCHC	PF00098.23	8e-11	1	2
MGP_AJ_P0066898	zf-CCHC	PF00098.23	8e-11	2	2
MGP_AJ_P0066900	zf-CCHC	PF00098.23	8.1e-11	1	2
MGP_AJ_P0066900	zf-CCHC	PF00098.23	8.1e-11	2	2
MGP_AJ_P0066898	PAP_assoc	PF03828.19	3.4e-28	1	2
MGP_AJ_P0066898	PAP_assoc	PF03828.19	3.4e-28	2	2
MGP_AJ_P0066900	PAP_assoc	PF03828.19	3.8e-28	1	2
MGP_AJ_P0066900	PAP_assoc	PF03828.19	3.8e-28	2	2
MGP_AJ_P0066901	PAP_assoc	PF03828.19	4.6e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0066899	-	679	-	MGP_AJ_P0066899	63 (aa)	-	-
MGP_AJ_T0066898	-	6055	XM_006502978	MGP_AJ_P0066898	1644 (aa)	XP_006503041	B2RX14
MGP_AJ_T0066907	-	2473	-	-	- (aa)	-	-
MGP_AJ_T0066906	-	484	-	-	- (aa)	-	-
MGP_AJ_T0066905	-	591	-	-	- (aa)	-	-
MGP_AJ_T0066904	-	567	-	-	- (aa)	-	-
MGP_AJ_T0066903	-	541	-	-	- (aa)	-	-
MGP_AJ_T0066902	-	636	-	-	- (aa)	-	-
MGP_AJ_T0066901	-	3283	-	MGP_AJ_P0066901	1006 (aa)	-	-
MGP_AJ_T0066900	-	5866	-	MGP_AJ_P0066900	1648 (aa)	-	-
MGP_AJ_T0066908	-	587	-	MGP_AJ_P0066908	105 (aa)	-	-

Gene Model

Click here to download MGP_AJ_G0028518's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AJ_G0028518's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0028518	Zcchc11	59	58.396	MGP_AJ_G0020600	Zcchc6	60	67.209