EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AJ_G0028579 (Gene tree)
Gene ID: -
Gene Symbol: Rad54l
Alias: RAD54|Rad54
Full Name: RAD54 like (S. cerevisiae)
Gene Type: protein_coding
Species: Mus_musculus_aj
Status: putative
Strand: Minus strand
Length: 29230 bases
Position: chr4:112487593-112516822
Accession: 894697
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0067186	ResIII	PF04851.15	2.2e-09	1	1
MGP_AJ_P0067187	ResIII	PF04851.15	2.2e-09	1	1
MGP_AJ_P0067186	DEAD	PF00270.29	9e-07	1	1
MGP_AJ_P0067187	DEAD	PF00270.29	9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0067190	-	1515	-	-	- (aa)	-	-
MGP_AJ_T0067185	-	4571	-	-	- (aa)	-	-
MGP_AJ_T0067186	-	2780	-	MGP_AJ_P0067186	747 (aa)	-	-
MGP_AJ_T0067187	-	3025	-	MGP_AJ_P0067187	747 (aa)	-	-
MGP_AJ_T0067188	-	654	-	-	- (aa)	-	-
MGP_AJ_T0067189	-	209	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_AJ_G0028579's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AJ_G0028579's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0028579	Rad54l	66	30.785	MGP_AJ_G0027603	Chd1l	50	30.584
MGP_AJ_G0028579	Rad54l	66	30.112	MGP_AJ_G0030796	Smarcad1	50	30.112
MGP_AJ_G0028579	Rad54l	88	44.748	MGP_AJ_G0028011	Rad54b	76	44.748
MGP_AJ_G0028579	Rad54l	66	33.267	MGP_AJ_G0035667	Smarca1	61	32.031