EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AJ_G0028812 (Gene tree)
Gene ID: -
Gene Symbol: Pum1
Alias: AA517475|Kiaa0099|Pumm|mKIAA0099
Full Name: pumilio RNA-binding family member 1
Gene Type: protein_coding
Species: Mus_musculus_aj
Status: putative
Strand: Plus strand
Length: 123224 bases
Position: chr4:127193142-127316365
Accession: 1931749
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0068219	PUF	PF00806.19	3.2e-70	1	8
MGP_AJ_P0068219	PUF	PF00806.19	3.2e-70	2	8
MGP_AJ_P0068219	PUF	PF00806.19	3.2e-70	3	8
MGP_AJ_P0068219	PUF	PF00806.19	3.2e-70	4	8
MGP_AJ_P0068219	PUF	PF00806.19	3.2e-70	5	8
MGP_AJ_P0068219	PUF	PF00806.19	3.2e-70	6	8
MGP_AJ_P0068219	PUF	PF00806.19	3.2e-70	7	8
MGP_AJ_P0068219	PUF	PF00806.19	3.2e-70	8	8
MGP_AJ_P0068222	PUF	PF00806.19	2.4e-69	1	8
MGP_AJ_P0068222	PUF	PF00806.19	2.4e-69	2	8
MGP_AJ_P0068222	PUF	PF00806.19	2.4e-69	3	8
MGP_AJ_P0068222	PUF	PF00806.19	2.4e-69	4	8
MGP_AJ_P0068222	PUF	PF00806.19	2.4e-69	5	8
MGP_AJ_P0068222	PUF	PF00806.19	2.4e-69	6	8
MGP_AJ_P0068222	PUF	PF00806.19	2.4e-69	7	8
MGP_AJ_P0068222	PUF	PF00806.19	2.4e-69	8	8
MGP_AJ_P0068218	PUF	PF00806.19	2.8e-69	1	8
MGP_AJ_P0068218	PUF	PF00806.19	2.8e-69	2	8
MGP_AJ_P0068218	PUF	PF00806.19	2.8e-69	3	8
MGP_AJ_P0068218	PUF	PF00806.19	2.8e-69	4	8
MGP_AJ_P0068218	PUF	PF00806.19	2.8e-69	5	8
MGP_AJ_P0068218	PUF	PF00806.19	2.8e-69	6	8
MGP_AJ_P0068218	PUF	PF00806.19	2.8e-69	7	8
MGP_AJ_P0068218	PUF	PF00806.19	2.8e-69	8	8
MGP_AJ_P0068223	PUF	PF00806.19	5.9e-69	1	8
MGP_AJ_P0068223	PUF	PF00806.19	5.9e-69	2	8
MGP_AJ_P0068223	PUF	PF00806.19	5.9e-69	3	8
MGP_AJ_P0068223	PUF	PF00806.19	5.9e-69	4	8
MGP_AJ_P0068223	PUF	PF00806.19	5.9e-69	5	8
MGP_AJ_P0068223	PUF	PF00806.19	5.9e-69	6	8
MGP_AJ_P0068223	PUF	PF00806.19	5.9e-69	7	8
MGP_AJ_P0068223	PUF	PF00806.19	5.9e-69	8	8
MGP_AJ_P0068217	PUF	PF00806.19	6e-69	1	8
MGP_AJ_P0068217	PUF	PF00806.19	6e-69	2	8
MGP_AJ_P0068217	PUF	PF00806.19	6e-69	3	8
MGP_AJ_P0068217	PUF	PF00806.19	6e-69	4	8
MGP_AJ_P0068217	PUF	PF00806.19	6e-69	5	8
MGP_AJ_P0068217	PUF	PF00806.19	6e-69	6	8
MGP_AJ_P0068217	PUF	PF00806.19	6e-69	7	8
MGP_AJ_P0068217	PUF	PF00806.19	6e-69	8	8

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0068219	-	4613	-	MGP_AJ_P0068219	944 (aa)	-	-
MGP_AJ_T0068218	-	5057	-	MGP_AJ_P0068218	1092 (aa)	-	-
MGP_AJ_T0068217	-	5388	XM_006539291	MGP_AJ_P0068217	1189 (aa)	XP_006539354	Q80U78
MGP_AJ_T0068220	-	1273	-	-	- (aa)	-	-
MGP_AJ_T0068221	-	693	-	MGP_AJ_P0068221	218 (aa)	-	-
MGP_AJ_T0068222	-	4017	-	MGP_AJ_P0068222	1186 (aa)	-	-
MGP_AJ_T0068223	-	3991	-	MGP_AJ_P0068223	1188 (aa)	-	-

Gene Model

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Protein-Protein Interaction (PPI)

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Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0028812	Pum1	86	87.294	MGP_AJ_G0019554	Pum2	100	88.835