EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AJ_G0029008 (Gene tree)
Gene ID: -
Gene Symbol: Zbtb17
Alias: AA589413|Lp-1|Miz1|Zfp100|Znf151|mZ13
Full Name: zinc finger and BTB domain containing 17
Gene Type: protein_coding
Species: Mus_musculus_aj
Status: putative
Strand: Plus strand
Length: 22972 bases
Position: chr4:138213670-138236641
Accession: 107410
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0069076	zf-C2H2	PF00096.26	2.8e-60	1	10
MGP_AJ_P0069076	zf-C2H2	PF00096.26	2.8e-60	2	10
MGP_AJ_P0069076	zf-C2H2	PF00096.26	2.8e-60	3	10
MGP_AJ_P0069076	zf-C2H2	PF00096.26	2.8e-60	4	10
MGP_AJ_P0069076	zf-C2H2	PF00096.26	2.8e-60	5	10
MGP_AJ_P0069076	zf-C2H2	PF00096.26	2.8e-60	6	10
MGP_AJ_P0069076	zf-C2H2	PF00096.26	2.8e-60	7	10
MGP_AJ_P0069076	zf-C2H2	PF00096.26	2.8e-60	8	10
MGP_AJ_P0069076	zf-C2H2	PF00096.26	2.8e-60	9	10
MGP_AJ_P0069076	zf-C2H2	PF00096.26	2.8e-60	10	10
MGP_AJ_P0069076	zf-met	PF12874.7	2.6e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0069076	-	2722	XM_006538727	MGP_AJ_P0069076	794 (aa)	XP_006538790	Q60821
MGP_AJ_T0069077	-	3478	-	-	- (aa)	-	-
MGP_AJ_T0069082	-	867	-	-	- (aa)	-	-
MGP_AJ_T0069081	-	771	-	-	- (aa)	-	-
MGP_AJ_T0069080	-	785	-	-	- (aa)	-	-
MGP_AJ_T0069078	-	2973	-	-	- (aa)	-	-
MGP_AJ_T0069079	-	338	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_AJ_G0029008's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AJ_G0029008's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0029008	Zbtb17	69	38.288	MGP_AJ_G0020671	Zfp748	91	44.109
MGP_AJ_G0029008	Zbtb17	56	40.741	MGP_AJ_G0031550	Zfp865	78	35.743
MGP_AJ_G0029008	Zbtb17	71	39.572	MGP_AJ_G0023214	Zfp945	93	39.583
MGP_AJ_G0029008	Zbtb17	72	34.627	MGP_AJ_G0023218	Zscan10	78	43.165
MGP_AJ_G0029008	Zbtb17	74	44.444	MGP_AJ_G0018554	Bcl6b	68	45.312
MGP_AJ_G0029008	Zbtb17	55	41.083	MGP_AJ_G0018368	Zfp867	81	41.083
MGP_AJ_G0029008	Zbtb17	55	43.322	MGP_AJ_G0018223	Zfp454	65	42.424
MGP_AJ_G0029008	Zbtb17	78	39.568	MGP_AJ_G0026574	Gzf1	83	37.118
MGP_AJ_G0029008	Zbtb17	62	50.909	MGP_AJ_G0029473	Zbtb49	62	67.742
MGP_AJ_G0029008	Zbtb17	79	46.354	MGP_AJ_G0027082	Mynn	85	46.354
MGP_AJ_G0029008	Zbtb17	79	32.955	MGP_AJ_G0020928	Zfp131	73	31.183
MGP_AJ_G0029008	Zbtb17	61	43.939	MGP_AJ_G0031795	Zfp112	61	43.939
MGP_AJ_G0029008	Zbtb17	58	44.980	MGP_AJ_G0031797	Zfp114	54	44.980
MGP_AJ_G0029008	Zbtb17	62	42.949	MGP_AJ_G0031796	Zfp235	71	44.248
MGP_AJ_G0029008	Zbtb17	59	43.976	MGP_AJ_G0033747	Zfp709	86	43.976
MGP_AJ_G0029008	Zbtb17	56	46.642	MGP_AJ_G0032098	Zfp141	60	46.642
MGP_AJ_G0029008	Zbtb17	58	38.614	MGP_AJ_G0030671	Repin1	93	38.614
MGP_AJ_G0029008	Zbtb17	59	36.986	MGP_AJ_G0018319	Zfp672	90	40.000
MGP_AJ_G0029008	Zbtb17	62	42.679	MGP_AJ_G0031800	Zfp93	100	43.544
MGP_AJ_G0029008	Zbtb17	56	44.086	MGP_AJ_G0031802	Zfp94	76	44.086
MGP_AJ_G0029008	Zbtb17	58	40.968	MGP_AJ_G0033748	Zfp882	85	42.985
MGP_AJ_G0029008	Zbtb17	58	41.141	MGP_AJ_G0020654	Zfp759	86	41.141
MGP_AJ_G0029008	Zbtb17	56	41.606	MGP_AJ_G0020653	Rslcan18	66	41.600
MGP_AJ_G0029008	Zbtb17	56	42.638	MGP_AJ_G0034459	Zfp872	83	41.964
MGP_AJ_G0029008	Zbtb17	54	46.512	MGP_AJ_G0034123	Zfp1	67	42.083
MGP_AJ_G0029008	Zbtb17	62	34.819	MGP_AJ_G0033966	Zfp319	91	37.805
MGP_AJ_G0029008	Zbtb17	58	42.857	MGP_AJ_G0032102	Zfp715	89	43.636
MGP_AJ_G0029008	Zbtb17	59	32.021	MGP_AJ_G0031832	Zfp574	71	38.532
MGP_AJ_G0029008	Zbtb17	64	42.899	MGP_AJ_G0023194	Zfp677	83	42.899
MGP_AJ_G0029008	Zbtb17	63	42.606	MGP_AJ_G0023196	Zfp51	82	42.183
MGP_AJ_G0029008	Zbtb17	61	42.727	MGP_AJ_G0024569	Zfp236	69	42.727
MGP_AJ_G0029008	Zbtb17	58	42.857	MGP_AJ_G0033015	Zfp768	52	42.231
MGP_AJ_G0029008	Zbtb17	56	41.518	MGP_AJ_G0020235	Zkscan4	50	41.518
MGP_AJ_G0029008	Zbtb17	69	44.706	MGP_AJ_G0031967	Zfp420	97	44.706
MGP_AJ_G0029008	Zbtb17	56	34.530	MGP_AJ_G0026859	Zfp334	65	39.216
MGP_AJ_G0029008	Zbtb17	78	38.433	MGP_AJ_G0031904	Zfp974	85	38.433