EuRBPDB

Description

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0069351	RRM_1	PF00076.22	1.2e-26	1	2
MGP_AJ_P0069351	RRM_1	PF00076.22	1.2e-26	2	2
MGP_AJ_P0069345	RRM_1	PF00076.22	4.4e-26	1	2
MGP_AJ_P0069345	RRM_1	PF00076.22	4.4e-26	2	2
MGP_AJ_P0069329	RRM_1	PF00076.22	4.5e-26	1	2
MGP_AJ_P0069329	RRM_1	PF00076.22	4.5e-26	2	2
MGP_AJ_P0069348	RRM_1	PF00076.22	4.5e-26	1	2
MGP_AJ_P0069348	RRM_1	PF00076.22	4.5e-26	2	2
MGP_AJ_P0069328	RRM_1	PF00076.22	4.8e-26	1	2
MGP_AJ_P0069328	RRM_1	PF00076.22	4.8e-26	2	2
MGP_AJ_P0069349	RRM_1	PF00076.22	4.8e-26	1	2
MGP_AJ_P0069349	RRM_1	PF00076.22	4.8e-26	2	2
MGP_AJ_P0069330	RRM_1	PF00076.22	4.9e-26	1	2
MGP_AJ_P0069330	RRM_1	PF00076.22	4.9e-26	2	2
MGP_AJ_P0069350	RRM_1	PF00076.22	4.9e-26	1	2
MGP_AJ_P0069350	RRM_1	PF00076.22	4.9e-26	2	2
MGP_AJ_P0069327	RRM_1	PF00076.22	1.2e-25	1	2
MGP_AJ_P0069327	RRM_1	PF00076.22	1.2e-25	2	2
MGP_AJ_P0069353	RRM_1	PF00076.22	4e-15	1	1
MGP_AJ_P0069354	RRM_1	PF00076.22	4.9e-11	1	1
MGP_AJ_P0069346	RRM_1	PF00076.22	6.6e-09	1	1
MGP_AJ_P0069347	RRM_1	PF00076.22	3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0069327	-	7249	XM_011250237	MGP_AJ_P0069327	414 (aa)	XP_011248539	Q921F2
MGP_AJ_T0069328	-	6341	-	MGP_AJ_P0069328	304 (aa)	-	-
MGP_AJ_T0069329	-	6323	-	MGP_AJ_P0069329	298 (aa)	-	-
MGP_AJ_T0069344	-	517	-	MGP_AJ_P0069344	77 (aa)	-	-
MGP_AJ_T0069345	-	1730	-	MGP_AJ_P0069345	295 (aa)	-	-
MGP_AJ_T0069346	-	495	-	MGP_AJ_P0069346	128 (aa)	-	-
MGP_AJ_T0069347	-	748	-	MGP_AJ_P0069347	84 (aa)	-	-
MGP_AJ_T0069340	-	741	-	MGP_AJ_P0069340	175 (aa)	-	-
MGP_AJ_T0069341	-	781	-	MGP_AJ_P0069341	140 (aa)	-	-
MGP_AJ_T0069342	-	684	-	MGP_AJ_P0069342	137 (aa)	-	-
MGP_AJ_T0069343	-	1304	-	MGP_AJ_P0069343	285 (aa)	-	-
MGP_AJ_T0069348	-	1096	-	MGP_AJ_P0069348	298 (aa)	-	-
MGP_AJ_T0069349	-	1011	-	MGP_AJ_P0069349	304 (aa)	-	-
MGP_AJ_T0069335	-	908	-	-	- (aa)	-	-
MGP_AJ_T0069334	-	676	-	MGP_AJ_P0069334	88 (aa)	-	-
MGP_AJ_T0069337	-	358	-	-	- (aa)	-	-
MGP_AJ_T0069336	-	617	-	-	- (aa)	-	-
MGP_AJ_T0069331	-	1773	-	MGP_AJ_P0069331	298 (aa)	-	-
MGP_AJ_T0069330	-	6253	-	MGP_AJ_P0069330	302 (aa)	-	-
MGP_AJ_T0069333	-	529	-	MGP_AJ_P0069333	98 (aa)	-	-
MGP_AJ_T0069332	-	731	-	-	- (aa)	-	-
MGP_AJ_T0069339	-	1011	-	MGP_AJ_P0069339	34 (aa)	-	-
MGP_AJ_T0069338	-	2006	-	MGP_AJ_P0069338	298 (aa)	-	-
MGP_AJ_T0069355	-	370	-	-	- (aa)	-	-
MGP_AJ_T0069354	-	740	-	MGP_AJ_P0069354	149 (aa)	-	-
MGP_AJ_T0069353	-	818	-	MGP_AJ_P0069353	243 (aa)	-	-
MGP_AJ_T0069352	-	1411	-	MGP_AJ_P0069352	84 (aa)	-	-
MGP_AJ_T0069351	-	709	-	MGP_AJ_P0069351	199 (aa)	-	-
MGP_AJ_T0069350	-	923	-	MGP_AJ_P0069350	302 (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0029094	Tardbp	79	34.021	MGP_AJ_G0029933	Msi1	62	34.021
MGP_AJ_G0029094	Tardbp	77	31.447	MGP_AJ_G0029748	Hnrnpdl	64	30.000
MGP_AJ_G0029094	Tardbp	77	38.194	MGP_AJ_G0029746	Hnrnpd	100	64.000
MGP_AJ_G0029094	Tardbp	94	30.282	MGP_AJ_G0030704	Hnrnpa2b1	66	30.348
MGP_AJ_G0029094	Tardbp	88	31.818	MGP_AJ_G0017470	Dazap1	89	35.065
MGP_AJ_G0029094	Tardbp	86	33.146	MGP_AJ_G0018238	Hnrnpab	82	32.099
MGP_AJ_G0029094	Tardbp	92	35.000	MGP_AJ_G0035731	Rbmx	78	35.000
MGP_AJ_G0029094	Tardbp	72	38.806	MGP_AJ_G0033314	Elavl1	59	31.481
MGP_AJ_G0029094	Tardbp	79	35.897	MGP_AJ_G0025834	-	62	35.897
MGP_AJ_G0029094	Tardbp	79	31.818	MGP_AJ_G0018892	Msi2	100	35.398