EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AJ_G0029146 (Gene tree)
Gene ID: -
Gene Symbol: Chd5
Alias: 4930532L22Rik|AW060752|B230399N07Rik|CHD-5|Kiaa0444
Full Name: chromodomain helicase DNA binding protein 5
Gene Type: protein_coding
Species: Mus_musculus_aj
Status: putative
Strand: Plus strand
Length: 53289 bases
Position: chr4:149898077-149951365
Accession: 3036258
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0069634	ResIII	PF04851.15	2.4e-07	1	1
MGP_AJ_P0069636	ResIII	PF04851.15	2.5e-07	1	1
MGP_AJ_P0069635	ResIII	PF04851.15	2.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0069638	-	6245	-	-	- (aa)	-	-
MGP_AJ_T0069634	-	9375	XM_006538929	MGP_AJ_P0069634	1915 (aa)	XP_006538992	A2A8L1
MGP_AJ_T0069635	-	9486	-	MGP_AJ_P0069635	1952 (aa)	-	-
MGP_AJ_T0069636	-	9122	-	MGP_AJ_P0069636	1946 (aa)	-	-
MGP_AJ_T0069637	-	280	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_AJ_G0029146's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AJ_G0029146's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0029146	Chd5	91	73.014	MGP_AJ_G0031255	Chd4	96	72.343
MGP_AJ_G0029146	Chd5	97	70.305	MGP_AJ_G0018497	Chd3	95	71.106
MGP_AJ_G0029146	Chd5	51	34.657	MGP_AJ_G0026776	Chd6	66	36.621