EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AJ_G0029473 (Gene tree)
Gene ID: -
Gene Symbol: Zbtb49
Alias: 4930518A03Rik|Zfp509|Znf509
Full Name: zinc finger and BTB domain containing 49
Gene Type: protein_coding
Species: Mus_musculus_aj
Status: putative
Strand: Minus strand
Length: 30710 bases
Position: chr5:35368776-35399485
Accession: 1922329
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0071497	zf-C2H2	PF00096.26	1.7e-35	1	7
MGP_AJ_P0071497	zf-C2H2	PF00096.26	1.7e-35	2	7
MGP_AJ_P0071497	zf-C2H2	PF00096.26	1.7e-35	3	7
MGP_AJ_P0071497	zf-C2H2	PF00096.26	1.7e-35	4	7
MGP_AJ_P0071497	zf-C2H2	PF00096.26	1.7e-35	5	7
MGP_AJ_P0071497	zf-C2H2	PF00096.26	1.7e-35	6	7
MGP_AJ_P0071497	zf-C2H2	PF00096.26	1.7e-35	7	7
MGP_AJ_P0071502	zf-C2H2	PF00096.26	1.7e-09	1	2
MGP_AJ_P0071502	zf-C2H2	PF00096.26	1.7e-09	2	2
MGP_AJ_P0071505	zf-C2H2	PF00096.26	8e-06	1	1
MGP_AJ_P0071497	zf-met	PF12874.7	3.1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0071499	-	1654	-	MGP_AJ_P0071499	110 (aa)	-	-
MGP_AJ_T0071498	-	2721	-	MGP_AJ_P0071498	428 (aa)	-	-
MGP_AJ_T0071497	-	2977	-	MGP_AJ_P0071497	756 (aa)	-	-
MGP_AJ_T0071496	-	2862	-	-	- (aa)	-	-
MGP_AJ_T0071503	-	688	-	MGP_AJ_P0071503	95 (aa)	-	-
MGP_AJ_T0071502	-	463	-	MGP_AJ_P0071502	120 (aa)	-	-
MGP_AJ_T0071501	-	2028	-	MGP_AJ_P0071501	65 (aa)	-	-
MGP_AJ_T0071500	-	2271	-	MGP_AJ_P0071500	444 (aa)	-	-
MGP_AJ_T0071506	-	1337	-	-	- (aa)	-	-
MGP_AJ_T0071505	-	2645	-	MGP_AJ_P0071505	480 (aa)	-	-
MGP_AJ_T0071504	-	420	-	MGP_AJ_P0071504	51 (aa)	-	-

Gene Model

Click here to download MGP_AJ_G0029473's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AJ_G0029473's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0029473	Zbtb49	61	50.704	MGP_AJ_G0031797	Zfp114	56	48.454
MGP_AJ_G0029473	Zbtb49	61	50.704	MGP_AJ_G0031796	Zfp235	63	50.000
MGP_AJ_G0029473	Zbtb49	76	50.000	MGP_AJ_G0033015	Zfp768	51	48.810
MGP_AJ_G0029473	Zbtb49	64	47.945	MGP_AJ_G0033019	E430018J23Rik	57	45.000
MGP_AJ_G0029473	Zbtb49	91	45.833	MGP_AJ_G0031904	Zfp974	89	41.451
MGP_AJ_G0029473	Zbtb49	62	67.742	MGP_AJ_G0029008	Zbtb17	62	50.909
MGP_AJ_G0029473	Zbtb49	89	50.000	MGP_AJ_G0031967	Zfp420	98	48.744
MGP_AJ_G0029473	Zbtb49	90	50.704	MGP_AJ_G0027082	Mynn	85	45.128
MGP_AJ_G0029473	Zbtb49	64	48.052	MGP_AJ_G0020653	Rslcan18	64	48.503
MGP_AJ_G0029473	Zbtb49	78	48.611	MGP_AJ_G0023196	Zfp51	81	45.361
MGP_AJ_G0029473	Zbtb49	78	44.872	MGP_AJ_G0018368	Zfp867	83	48.187
MGP_AJ_G0029473	Zbtb49	94	45.833	MGP_AJ_G0026859	Zfp334	65	47.436
MGP_AJ_G0029473	Zbtb49	63	55.882	MGP_AJ_G0031542	Zfp628	53	41.949
MGP_AJ_G0029473	Zbtb49	85	47.222	MGP_AJ_G0020671	Zfp748	92	47.668
MGP_AJ_G0029473	Zbtb49	74	50.000	MGP_AJ_G0031832	Zfp574	60	43.651
MGP_AJ_G0029473	Zbtb49	78	45.833	MGP_AJ_G0031148	Zfp637	78	46.061
MGP_AJ_G0029473	Zbtb49	78	47.143	MGP_AJ_G0018319	Zfp672	96	48.214
MGP_AJ_G0029473	Zbtb49	68	46.032	MGP_AJ_G0026427	Zfp661	60	44.845
MGP_AJ_G0029473	Zbtb49	63	45.455	MGP_AJ_G0020619	Gm5141	89	47.093
MGP_AJ_G0029473	Zbtb49	78	46.479	MGP_AJ_G0023194	Zfp677	79	46.500
MGP_AJ_G0029473	Zbtb49	62	47.887	MGP_AJ_G0024569	Zfp236	62	43.023
MGP_AJ_G0029473	Zbtb49	63	50.000	MGP_AJ_G0018223	Zfp454	65	47.423
MGP_AJ_G0029473	Zbtb49	62	51.786	MGP_AJ_G0029808	Gfi1	100	49.219
MGP_AJ_G0029473	Zbtb49	62	43.836	MGP_AJ_G0035429	Zfp651	71	43.519
MGP_AJ_G0029473	Zbtb49	76	48.611	MGP_AJ_G0034123	Zfp1	63	49.485
MGP_AJ_G0029473	Zbtb49	62	45.205	MGP_AJ_G0018955	Zfp652	57	42.593
MGP_AJ_G0029473	Zbtb49	62	51.389	MGP_AJ_G0032098	Zfp141	59	49.342
MGP_AJ_G0029473	Zbtb49	96	45.070	MGP_AJ_G0030801	Prdm5	79	40.244
MGP_AJ_G0029473	Zbtb49	66	47.222	MGP_AJ_G0020235	Zkscan4	51	45.342
MGP_AJ_G0029473	Zbtb49	60	45.714	MGP_AJ_G0018554	Bcl6b	54	47.368
MGP_AJ_G0029473	Zbtb49	68	48.611	MGP_AJ_G0033747	Zfp709	88	47.423
MGP_AJ_G0029473	Zbtb49	85	45.714	MGP_AJ_G0033748	Zfp882	85	46.114
MGP_AJ_G0029473	Zbtb49	75	45.833	MGP_AJ_G0020654	Zfp759	90	45.503
MGP_AJ_G0029473	Zbtb49	73	49.275	MGP_AJ_G0032102	Zfp715	62	45.026
MGP_AJ_G0029473	Zbtb49	95	48.611	MGP_AJ_G0021971	Zfp251	69	49.741
MGP_AJ_G0029473	Zbtb49	62	46.479	MGP_AJ_G0026574	Gzf1	66	44.103
MGP_AJ_G0029473	Zbtb49	78	44.444	MGP_AJ_G0034459	Zfp872	80	44.330
MGP_AJ_G0029473	Zbtb49	62	47.887	MGP_AJ_G0016535	Zbtb41	71	41.279
MGP_AJ_G0029473	Zbtb49	82	50.000	MGP_AJ_G0031802	Zfp94	76	48.454
MGP_AJ_G0029473	Zbtb49	74	47.297	MGP_AJ_G0031801	Zfp61	50	47.938
MGP_AJ_G0029473	Zbtb49	59	49.296	MGP_AJ_G0031800	Zfp93	95	46.907
MGP_AJ_G0029473	Zbtb49	60	47.222	MGP_AJ_G0030671	Repin1	95	38.889
MGP_AJ_G0029473	Zbtb49	60	47.619	MGP_AJ_G0023955	Zbtb14	64	46.000
MGP_AJ_G0029473	Zbtb49	77	45.833	MGP_AJ_G0023214	Zfp945	77	43.455
MGP_AJ_G0029473	Zbtb49	62	50.704	MGP_AJ_G0023218	Zscan10	78	47.953