EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_AJ_G0029555 (Gene tree)
Gene ID
-
Gene Symbol
Rbm47
Alias
9530077J19Rik
Full Name
RNA binding motif protein 47
Gene Type
protein_coding
Species
Mus_musculus_aj
Status
putative
Strand
Minus strand
Length
157541 bases
Position
chr5:63256980-63414520
Accession
2384294
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_AJ_P0071975RRM_1PF00076.223.5e-3713
MGP_AJ_P0071975RRM_1PF00076.223.5e-3723
MGP_AJ_P0071975RRM_1PF00076.223.5e-3733
MGP_AJ_P0071971RRM_1PF00076.225.6e-3713
MGP_AJ_P0071971RRM_1PF00076.225.6e-3723
MGP_AJ_P0071971RRM_1PF00076.225.6e-3733
MGP_AJ_P0071972RRM_1PF00076.225.6e-3713
MGP_AJ_P0071972RRM_1PF00076.225.6e-3723
MGP_AJ_P0071972RRM_1PF00076.225.6e-3733
MGP_AJ_P0071973RRM_1PF00076.225.6e-3713
MGP_AJ_P0071973RRM_1PF00076.225.6e-3723
MGP_AJ_P0071973RRM_1PF00076.225.6e-3733
MGP_AJ_P0071974RRM_1PF00076.225.6e-3713
MGP_AJ_P0071974RRM_1PF00076.225.6e-3723
MGP_AJ_P0071974RRM_1PF00076.225.6e-3733
MGP_AJ_P0071976RRM_1PF00076.225.6e-3713
MGP_AJ_P0071976RRM_1PF00076.225.6e-3723
MGP_AJ_P0071976RRM_1PF00076.225.6e-3733
MGP_AJ_P0071977RRM_1PF00076.225.6e-3713
MGP_AJ_P0071977RRM_1PF00076.225.6e-3723
MGP_AJ_P0071977RRM_1PF00076.225.6e-3733
MGP_AJ_P0071979RRM_1PF00076.222.9e-1511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_AJ_T0071972-5383-MGP_AJ_P0071972584 (aa)--
MGP_AJ_T0071973-4814-MGP_AJ_P0071973584 (aa)--
MGP_AJ_T0071971-4874XM_006503956MGP_AJ_P0071971584 (aa)XP_006504019Q91WT8
MGP_AJ_T0071976-3240-MGP_AJ_P0071976584 (aa)--
MGP_AJ_T0071977-2221-MGP_AJ_P0071977584 (aa)--
MGP_AJ_T0071974-5067-MGP_AJ_P0071974584 (aa)--
MGP_AJ_T0071975-3033-MGP_AJ_P0071975515 (aa)--
MGP_AJ_T0071978-2387--- (aa)--
MGP_AJ_T0071979-703-MGP_AJ_P0071979158 (aa)--
MGP_AJ_T0071983-453--- (aa)--
MGP_AJ_T0071982-529-MGP_AJ_P00719826 (aa)--
MGP_AJ_T0071981-332-MGP_AJ_P007198113 (aa)--
MGP_AJ_T0071980-504--- (aa)--
MGP_AJ_T0071984-465--- (aa)--
Gene Model
Click here to download MGP_AJ_G0029555's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_AJ_G0029555's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_AJ_G0029555Rbm478858.451MGP_AJ_G0035090Syncrip7557.522
MGP_AJ_G0029555Rbm478967.376MGP_AJ_G0025014A1cf7459.641
MGP_AJ_G0029555Rbm479473.649MGP_AJ_G0027293Rbm466672.468
MGP_AJ_G0029555Rbm478150.781MGP_AJ_G0024256Dnd15841.748

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us