EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AJ_G0029724 (Gene tree)
Gene ID: -
Gene Symbol: Sept11
Alias: 6230410I01Rik|AW548875|D5Ertd606e
Full Name: septin 11
Gene Type: protein_coding
Species: Mus_musculus_aj
Status: putative
Strand: Plus strand
Length: 87065 bases
Position: chr5:90554966-90642030
Accession: 1277214
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0072778	MMR_HSR1	PF01926.23	6.8e-07	1	1
MGP_AJ_P0072776	MMR_HSR1	PF01926.23	2.1e-06	1	1
MGP_AJ_P0072774	MMR_HSR1	PF01926.23	2.1e-06	1	1
MGP_AJ_P0072779	MMR_HSR1	PF01926.23	2.2e-06	1	1
MGP_AJ_P0072781	MMR_HSR1	PF01926.23	2.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0072780	-	434	-	MGP_AJ_P0072780	97 (aa)	-	-
MGP_AJ_T0072781	-	1380	-	MGP_AJ_P0072781	432 (aa)	-	-
MGP_AJ_T0072782	-	1119	-	-	- (aa)	-	-
MGP_AJ_T0072775	-	640	-	-	- (aa)	-	-
MGP_AJ_T0072774	-	5028	XM_006535104	MGP_AJ_P0072774	429 (aa)	XP_006535161	Q8C1B7
MGP_AJ_T0072777	-	1066	-	MGP_AJ_P0072777	204 (aa)	-	-
MGP_AJ_T0072776	-	3478	-	MGP_AJ_P0072776	425 (aa)	-	-
MGP_AJ_T0072779	-	2428	-	MGP_AJ_P0072779	431 (aa)	-	-
MGP_AJ_T0072778	-	1792	-	MGP_AJ_P0072778	425 (aa)	-	-

Gene Model

Click here to download MGP_AJ_G0029724's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AJ_G0029724's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0029724	Sept11	100	82.201	MGP_AJ_G0035605	Sept6	100	82.028
MGP_AJ_G0029724	Sept11	67	42.953	MGP_AJ_G0019414	Sept9	81	46.970
MGP_AJ_G0029724	Sept11	98	72.771	MGP_AJ_G0017230	Sept10	85	76.712
MGP_AJ_G0029724	Sept11	76	40.762	MGP_AJ_G0033009	Sept1	100	40.816
MGP_AJ_G0029724	Sept11	69	44.000	MGP_AJ_G0022100	Sept3	89	44.000
MGP_AJ_G0029724	Sept11	60	38.077	MGP_AJ_G0022441	Sept12	82	37.931
MGP_AJ_G0029724	Sept11	76	41.493	MGP_AJ_G0022577	Sept5	90	40.828
MGP_AJ_G0029724	Sept11	69	43.234	MGP_AJ_G0016324	Sept2	100	42.202
MGP_AJ_G0029724	Sept11	67	43.878	MGP_AJ_G0018873	Sept4	85	45.000
MGP_AJ_G0029724	Sept11	99	39.954	MGP_AJ_G0034475	Sept7	80	41.737
MGP_AJ_G0029724	Sept11	99	79.157	MGP_AJ_G0018267	Sept8	88	81.915