EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_AJ_G0029746 (Gene tree)
Gene ID
-
Gene Symbol
Hnrnpd
Alias
Auf1|Hnrpd
Full Name
heterogeneous nuclear ribonucleoprotein D
Gene Type
protein_coding
Species
Mus_musculus_aj
Status
putative
Strand
Minus strand
Length
27365 bases
Position
chr5:97633058-97660422
Accession
101947
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_AJ_P0072864CBFNTPF08143.111.2e-1111
MGP_AJ_P0072862CBFNTPF08143.111.3e-1111
MGP_AJ_P0072863CBFNTPF08143.111.6e-1111
MGP_AJ_P0072861CBFNTPF08143.111.7e-1111
MGP_AJ_P0072864RRM_1PF00076.227.4e-3612
MGP_AJ_P0072864RRM_1PF00076.227.4e-3622
MGP_AJ_P0072862RRM_1PF00076.229e-3612
MGP_AJ_P0072862RRM_1PF00076.229e-3622
MGP_AJ_P0072863RRM_1PF00076.221.2e-3512
MGP_AJ_P0072863RRM_1PF00076.221.2e-3522
MGP_AJ_P0072861RRM_1PF00076.221.4e-3512
MGP_AJ_P0072861RRM_1PF00076.221.4e-3522
MGP_AJ_P0072870RRM_1PF00076.222.3e-2311
MGP_AJ_P0072871RRM_1PF00076.221.4e-0611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_AJ_T0072871-478-MGP_AJ_P007287125 (aa)--
MGP_AJ_T0072869-425--- (aa)--
MGP_AJ_T0072868-1104-MGP_AJ_P007286886 (aa)--
MGP_AJ_T0072865-1117-MGP_AJ_P0072865215 (aa)--
MGP_AJ_T0072864-1537-MGP_AJ_P0072864287 (aa)--
MGP_AJ_T0072867-699-MGP_AJ_P0072867131 (aa)--
MGP_AJ_T0072866-737-MGP_AJ_P0072866150 (aa)--
MGP_AJ_T0072861-6806XM_006534735MGP_AJ_P0072861355 (aa)XP_006534798Q60668
MGP_AJ_T0072870-493-MGP_AJ_P0072870107 (aa)--
MGP_AJ_T0072863-1670-MGP_AJ_P0072863336 (aa)--
MGP_AJ_T0072862-2000-MGP_AJ_P0072862306 (aa)--
Gene Model
Click here to download MGP_AJ_G0029746's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_AJ_G0029746's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_AJ_G0029746Hnrnpd7034.667MGP_AJ_G0035518Rbm38036.709
MGP_AJ_G0029746Hnrnpd10072.000MGP_AJ_G0018892Msi210053.982
MGP_AJ_G0029746Hnrnpd10080.000MGP_AJ_G0029748Hnrnpdl8965.278
MGP_AJ_G0029746Hnrnpd6935.294MGP_AJ_G0016018Boll5134.783
MGP_AJ_G0029746Hnrnpd10037.838MGP_AJ_G0020581Hnrnpa08634.173
MGP_AJ_G0029746Hnrnpd8437.363MGP_AJ_G0035731Rbmx8343.750
MGP_AJ_G0029746Hnrnpd6938.667MGP_AJ_G0033788-5644.898
MGP_AJ_G0029746Hnrnpd7032.000MGP_AJ_G0028407Elavl25831.169
MGP_AJ_G0029746Hnrnpd10088.000MGP_AJ_G0018238Hnrnpab7972.052
MGP_AJ_G0029746Hnrnpd9738.806MGP_AJ_G0020801Gm171906636.885
MGP_AJ_G0029746Hnrnpd10068.000MGP_AJ_G0029933Msi15949.485
MGP_AJ_G0029746Hnrnpd5535.593MGP_AJ_G0030941Tia16932.308
MGP_AJ_G0029746Hnrnpd8436.559MGP_AJ_G0017464Cirbp8338.776
MGP_AJ_G0029746Hnrnpd7133.333MGP_AJ_G0019946Slirp7033.333
MGP_AJ_G0029746Hnrnpd9744.545MGP_AJ_G0030704Hnrnpa2b17241.148
MGP_AJ_G0029746Hnrnpd10056.000MGP_AJ_G0017470Dazap19841.935
MGP_AJ_G0029746Hnrnpd10064.000MGP_AJ_G0029094Tardbp7738.194
MGP_AJ_G0029746Hnrnpd5731.884MGP_AJ_G0030062Snrnp355135.484
MGP_AJ_G0029746Hnrnpd5136.364MGP_AJ_G0026919Rbm385136.364
MGP_AJ_G0029746Hnrnpd9740.909MGP_AJ_G0025834-6640.291

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