EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AJ_G0029964 (Gene tree)
Gene ID: -
Gene Symbol: Rbm19
Alias: 1200009A02Rik|AV302714|NPO
Full Name: RNA binding motif protein 19
Gene Type: protein_coding
Species: Mus_musculus_aj
Status: putative
Strand: Plus strand
Length: 82603 bases
Position: chr5:118338505-118421107
Accession: 1921361
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0073932	RRM_1	PF00076.22	1.1e-85	1	5
MGP_AJ_P0073932	RRM_1	PF00076.22	1.1e-85	2	5
MGP_AJ_P0073932	RRM_1	PF00076.22	1.1e-85	3	5
MGP_AJ_P0073932	RRM_1	PF00076.22	1.1e-85	4	5
MGP_AJ_P0073932	RRM_1	PF00076.22	1.1e-85	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0073932	-	4010	-	MGP_AJ_P0073932	952 (aa)	-	Q8R3C6
MGP_AJ_T0073933	-	455	-	-	- (aa)	-	-
MGP_AJ_T0073934	-	3900	-	MGP_AJ_P0073934	870 (aa)	-	-
MGP_AJ_T0073935	-	600	-	-	- (aa)	-	-
MGP_AJ_T0073936	-	1396	-	-	- (aa)	-	-
MGP_AJ_T0073937	-	635	-	-	- (aa)	-	-
MGP_AJ_T0073938	-	485	-	-	- (aa)	-	-
MGP_AJ_T0073939	-	1933	-	-	- (aa)	-	-
MGP_AJ_T0073941	-	360	-	-	- (aa)	-	-
MGP_AJ_T0073940	-	391	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_AJ_G0029964's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AJ_G0029964's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0029964	Rbm19	70	34.667	MGP_AJ_G0024336	Pabpc2	59	34.667
MGP_AJ_G0029964	Rbm19	70	34.667	MGP_AJ_G0023107	Pabpc6	57	34.667
MGP_AJ_G0029964	Rbm19	62	34.667	MGP_AJ_G0021757	Pabpc1	58	34.667
MGP_AJ_G0029964	Rbm19	72	36.066	MGP_AJ_G0026800	Pabpc1l	60	35.484