EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AJ_G0029980 (Gene tree)
Gene ID: -
Gene Symbol: Oas1c
Alias: Oasl2|Oasl5|oasl5
Full Name: 2'-5' oligoadenylate synthetase 1C
Gene Type: protein_coding
Species: Mus_musculus_aj
Status: putative
Strand: Minus strand
Length: 12289 bases
Position: chr5:119050657-119062945
Accession: 2149633
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0074000	OAS1_C	PF10421.9	7.8e-74	1	1
MGP_AJ_P0074001	OAS1_C	PF10421.9	3.9e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0074001	-	416	-	MGP_AJ_P0074001	39 (aa)	-	-
MGP_AJ_T0074000	-	2291	XM_006530118	MGP_AJ_P0074000	362 (aa)	XP_006530181	D3YWG4
MGP_AJ_T0074002	-	782	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_AJ_G0029980's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AJ_G0029980's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0029980	Oas1c	96	34.091	MGP_AJ_G0029917	Oasl1	66	34.091
MGP_AJ_G0029980	Oas1c	94	33.141	MGP_AJ_G0029916	Oasl2	67	33.141
MGP_AJ_G0029980	Oas1c	100	76.923	MGP_AJ_G0029984	-	100	65.116
MGP_AJ_G0029980	Oas1c	92	91.667	MGP_AJ_G0029981	Oas1f	96	76.420
MGP_AJ_G0029980	Oas1c	100	94.872	MGP_AJ_G0029985	Oas1d	100	70.661
MGP_AJ_G0029980	Oas1c	92	86.111	MGP_AJ_G0029982	Oas1h	97	61.732
MGP_AJ_G0029980	Oas1c	100	76.923	MGP_AJ_G0029983	-	100	65.116
MGP_AJ_G0029980	Oas1c	100	94.872	MGP_AJ_G0029979	Oas1e	96	67.536
MGP_AJ_G0029980	Oas1c	92	62.162	MGP_AJ_G0029978	Oas3	92	43.548
MGP_AJ_G0029980	Oas1c	98	42.363	MGP_AJ_G0029977	Oas2	97	44.915