EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AJ_G0030062 (Gene tree)
Gene ID: -
Gene Symbol: Snrnp35
Alias: 6330548G22Rik|U1snrnpbp
Full Name: small nuclear ribonucleoprotein 35 (U11/U12)
Gene Type: protein_coding
Species: Mus_musculus_aj
Status: putative
Strand: Plus strand
Length: 7982 bases
Position: chr5:122957227-122965208
Accession: 1923417
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0074530	RRM_1	PF00076.22	1.1e-16	1	1
MGP_AJ_P0074529	RRM_1	PF00076.22	1.3e-16	1	1
MGP_AJ_P0074531	RRM_1	PF00076.22	1.3e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0074529	-	1115	XM_006530494	MGP_AJ_P0074529	244 (aa)	XP_006530557	Q9D384
MGP_AJ_T0074531	-	1181	-	MGP_AJ_P0074531	244 (aa)	-	-
MGP_AJ_T0074530	-	449	-	MGP_AJ_P0074530	121 (aa)	-	-

Gene Model

Click here to download MGP_AJ_G0030062's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AJ_G0030062's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0030062	Snrnp35	55	36.364	MGP_AJ_G0035731	Rbmx	71	35.616
MGP_AJ_G0030062	Snrnp35	61	48.649	MGP_AJ_G0032196	Snrnp70	70	46.667
MGP_AJ_G0030062	Snrnp35	51	35.484	MGP_AJ_G0029746	Hnrnpd	57	31.884
MGP_AJ_G0030062	Snrnp35	55	34.848	MGP_AJ_G0035518	Rbm3	73	33.333
MGP_AJ_G0030062	Snrnp35	59	33.803	MGP_AJ_G0028539	Elavl4	57	37.037
MGP_AJ_G0030062	Snrnp35	60	37.500	MGP_AJ_G0028407	Elavl2	67	35.714