EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AJ_G0030065 (Gene tree)
Gene ID: -
Gene Symbol: Ddx55
Alias: 2810021H22Rik|Kiaa1595|mKIAA1595
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 55
Gene Type: protein_coding
Species: Mus_musculus_aj
Status: putative
Strand: Plus strand
Length: 15234 bases
Position: chr5:123027770-123043003
Accession: 1915098
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0074540	ResIII	PF04851.15	5.6e-07	1	1
MGP_AJ_P0074540	DEAD	PF00270.29	1.1e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0074544	-	824	-	-	- (aa)	-	-
MGP_AJ_T0074540	-	2793	-	MGP_AJ_P0074540	618 (aa)	-	-
MGP_AJ_T0074541	-	445	-	-	- (aa)	-	-
MGP_AJ_T0074542	-	477	-	-	- (aa)	-	-
MGP_AJ_T0074543	-	1429	-	-	- (aa)	-	-
MGP_AJ_T0074539	-	3516	-	MGP_AJ_P0074539	135 (aa)	-	Q6ZPL9

Gene Model

Click here to download MGP_AJ_G0030065's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AJ_G0030065's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0030065	Ddx55	58	30.886	MGP_AJ_G0034055	Ddx28	69	30.886
MGP_AJ_G0030065	Ddx55	57	32.687	MGP_AJ_G0022038	Ddx17	53	32.687
MGP_AJ_G0030065	Ddx55	57	35.977	MGP_AJ_G0031388	Ddx47	81	35.977
MGP_AJ_G0030065	Ddx55	77	36.175	MGP_AJ_G0016395	Ddx18	68	36.326
MGP_AJ_G0030065	Ddx55	56	31.429	MGP_AJ_G0016524	Ddx59	54	31.429
MGP_AJ_G0030065	Ddx55	57	35.635	MGP_AJ_G0020556	Ddx41	55	35.440
MGP_AJ_G0030065	Ddx55	58	30.137	MGP_AJ_G0022640	Eif4a2	93	30.362
MGP_AJ_G0030065	Ddx55	72	31.528	MGP_AJ_G0025510	Ddx31	74	31.528
MGP_AJ_G0030065	Ddx55	61	30.750	MGP_AJ_G0018830	Ddx52	62	30.750
MGP_AJ_G0030065	Ddx55	56	33.056	MGP_AJ_G0033682	Ddx49	92	33.238
MGP_AJ_G0030065	Ddx55	57	30.137	MGP_AJ_G0019281	Ddx5	67	30.137
MGP_AJ_G0030065	Ddx55	58	32.044	MGP_AJ_G0035049	Ddx43	53	32.044
MGP_AJ_G0030065	Ddx55	57	35.733	MGP_AJ_G0016900	D1Pas1	54	35.733
MGP_AJ_G0030065	Ddx55	73	38.631	MGP_AJ_G0034788	Ddx10	50	38.631
MGP_AJ_G0030065	Ddx55	57	35.200	MGP_AJ_G0035549	Ddx3x	54	35.106