EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AJ_G0030181 (Gene tree)
Gene ID: -
Gene Symbol: Plod3
Alias: AI414586|LH3|lysyl hydroxylase 3
Full Name: procollagen-lysine%2C 2-oxoglutarate 5-dioxygenase 3
Gene Type: protein_coding
Species: Mus_musculus_aj
Status: putative
Strand: Plus strand
Length: 9638 bases
Position: chr5:135559914-135569551
Accession: 1347008
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0075188	2OG-FeII_Oxy	PF03171.20	3.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0075189	-	2362	-	-	- (aa)	-	-
MGP_AJ_T0075188	-	3280	XM_006504423	MGP_AJ_P0075188	741 (aa)	XP_006504486	Q9R0E1
MGP_AJ_T0075190	-	2843	-	-	- (aa)	-	-
MGP_AJ_T0075191	-	932	-	-	- (aa)	-	-
MGP_AJ_T0075192	-	842	-	-	- (aa)	-	-
MGP_AJ_T0075193	-	600	-	MGP_AJ_P0075193	199 (aa)	-	-

Gene Model

Click here to download MGP_AJ_G0030181's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AJ_G0030181's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0030181	Plod3	100	57.895	MGP_AJ_G0035111	Plod2	95	59.829
MGP_AJ_G0030181	Plod3	95	60.369	MGP_AJ_G0029075	Plod1	97	60.369