EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AJ_G0030704 (Gene tree)
Gene ID: -
Gene Symbol: Hnrnpa2b1
Alias: 9130414A06Rik|Hnrpa2|Hnrpa2b1|hnrnp-A
Full Name: heterogeneous nuclear ribonucleoprotein A2/B1
Gene Type: protein_coding
Species: Mus_musculus_aj
Status: putative
Strand: Minus strand
Length: 10707 bases
Position: chr6:48283507-48294213
Accession: 104819
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0077598	RRM_1	PF00076.22	3.3e-32	1	2
MGP_AJ_P0077598	RRM_1	PF00076.22	3.3e-32	2	2
MGP_AJ_P0077604	RRM_1	PF00076.22	3.3e-32	1	2
MGP_AJ_P0077604	RRM_1	PF00076.22	3.3e-32	2	2
MGP_AJ_P0077601	RRM_1	PF00076.22	5e-32	1	2
MGP_AJ_P0077601	RRM_1	PF00076.22	5e-32	2	2
MGP_AJ_P0077605	RRM_1	PF00076.22	5e-32	1	2
MGP_AJ_P0077605	RRM_1	PF00076.22	5e-32	2	2
MGP_AJ_P0077603	RRM_1	PF00076.22	5.5e-32	1	2
MGP_AJ_P0077603	RRM_1	PF00076.22	5.5e-32	2	2
MGP_AJ_P0077607	RRM_1	PF00076.22	1.9e-15	1	1
MGP_AJ_P0077607	HnRNPA1	PF11627.8	1.9e-16	1	1
MGP_AJ_P0077598	HnRNPA1	PF11627.8	2.1e-06	1	1
MGP_AJ_P0077604	HnRNPA1	PF11627.8	2.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0077606	-	766	-	-	- (aa)	-	-
MGP_AJ_T0077607	-	466	-	MGP_AJ_P0077607	154 (aa)	-	-
MGP_AJ_T0077604	-	1518	-	MGP_AJ_P0077604	301 (aa)	-	-
MGP_AJ_T0077605	-	1638	-	MGP_AJ_P0077605	341 (aa)	-	-
MGP_AJ_T0077602	-	1554	-	-	- (aa)	-	-
MGP_AJ_T0077603	-	1728	-	MGP_AJ_P0077603	353 (aa)	-	-
MGP_AJ_T0077600	-	1542	-	MGP_AJ_P0077600	301 (aa)	-	-
MGP_AJ_T0077601	-	1662	-	MGP_AJ_P0077601	341 (aa)	-	-
MGP_AJ_T0077610	-	3645	-	-	- (aa)	-	-
MGP_AJ_T0077598	-	1647	XM_006506373	MGP_AJ_P0077598	301 (aa)	XP_006506436	O88569
MGP_AJ_T0077599	-	1703	-	MGP_AJ_P0077599	353 (aa)	-	-
MGP_AJ_T0077608	-	706	-	-	- (aa)	-	-
MGP_AJ_T0077609	-	596	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_AJ_G0030704's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AJ_G0030704's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0030704	Hnrnpa2b1	66	30.348	MGP_AJ_G0029094	Tardbp	94	30.282
MGP_AJ_G0030704	Hnrnpa2b1	66	32.143	MGP_AJ_G0034883	Celf6	79	31.250
MGP_AJ_G0030704	Hnrnpa2b1	59	82.418	MGP_AJ_G0025834	-	63	68.205
MGP_AJ_G0030704	Hnrnpa2b1	50	44.737	MGP_AJ_G0017464	Cirbp	70	44.737
MGP_AJ_G0030704	Hnrnpa2b1	58	38.824	MGP_AJ_G0029748	Hnrnpdl	58	38.542
MGP_AJ_G0030704	Hnrnpa2b1	72	41.148	MGP_AJ_G0029746	Hnrnpd	97	44.545
MGP_AJ_G0030704	Hnrnpa2b1	61	38.068	MGP_AJ_G0018238	Hnrnpab	64	37.368
MGP_AJ_G0030704	Hnrnpa2b1	60	41.026	MGP_AJ_G0017470	Dazap1	99	40.237
MGP_AJ_G0030704	Hnrnpa2b1	56	48.193	MGP_AJ_G0018892	Msi2	100	44.348
MGP_AJ_G0030704	Hnrnpa2b1	69	31.776	MGP_AJ_G0016018	Boll	64	33.333
MGP_AJ_G0030704	Hnrnpa2b1	91	41.379	MGP_AJ_G0029933	Msi1	61	43.750
MGP_AJ_G0030704	Hnrnpa2b1	59	55.307	MGP_AJ_G0020581	Hnrnpa0	91	49.640
MGP_AJ_G0030704	Hnrnpa2b1	56	38.554	MGP_AJ_G0035731	Rbmx	90	40.299