EuRBPDB

Description

Ensembl ID: MGP_AJ_G0030796 (Gene tree)
Gene ID: -
Gene Symbol: Smarcad1
Alias: AV081750|AW226546|D6Pas1|Etl1|Kiaa1122|mKIAA1122
Full Name: SWI/SNF-related%2C matrix-associated actin-dependent regulator of chromatin%2C subfamily a%2C containing DEAD/H box 1
Gene Type: protein_coding
Species: Mus_musculus_aj
Status: putative
Strand: Plus strand
Length: 67982 bases
Position: chr6:62126919-62194900
Accession: 95453
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0077929	ResIII	PF04851.15	1.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0077934	-	739	-	MGP_AJ_P0077934	73 (aa)	-	-
MGP_AJ_T0077935	-	2821	-	-	- (aa)	-	-
MGP_AJ_T0077936	-	4179	-	MGP_AJ_P0077936	123 (aa)	-	-
MGP_AJ_T0077937	-	643	-	-	- (aa)	-	-
MGP_AJ_T0077930	-	466	-	-	- (aa)	-	-
MGP_AJ_T0077931	-	600	-	MGP_AJ_P0077931	73 (aa)	-	-
MGP_AJ_T0077932	-	734	-	MGP_AJ_P0077932	73 (aa)	-	-
MGP_AJ_T0077933	-	472	-	MGP_AJ_P0077933	68 (aa)	-	-
MGP_AJ_T0077938	-	635	-	-	- (aa)	-	-
MGP_AJ_T0077939	-	726	-	MGP_AJ_P0077939	45 (aa)	-	-
MGP_AJ_T0077929	-	5168	-	MGP_AJ_P0077929	1021 (aa)	-	-
MGP_AJ_T0077928	-	602	XM_006505509	MGP_AJ_P0077928	134 (aa)	XP_006505572	Q04692
MGP_AJ_T0077941	-	643	-	-	- (aa)	-	-
MGP_AJ_T0077940	-	3062	-	-	- (aa)	-	-
MGP_AJ_T0077942	-	2526	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0030796	Smarcad1	50	30.112	MGP_AJ_G0028579	Rad54l	66	30.112
MGP_AJ_G0030796	Smarcad1	50	35.135	MGP_AJ_G0027603	Chd1l	51	35.135
MGP_AJ_G0030796	Smarcad1	51	37.705	MGP_AJ_G0025072	Hells	66	37.887