EuRBPDB

Description

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0078639	RRM_1	PF00076.22	4.5e-68	1	3
MGP_AJ_P0078639	RRM_1	PF00076.22	4.5e-68	2	3
MGP_AJ_P0078639	RRM_1	PF00076.22	4.5e-68	3	3
MGP_AJ_P0078633	RRM_1	PF00076.22	1.9e-67	1	3
MGP_AJ_P0078633	RRM_1	PF00076.22	1.9e-67	2	3
MGP_AJ_P0078633	RRM_1	PF00076.22	1.9e-67	3	3
MGP_AJ_P0078625	RRM_1	PF00076.22	2.1e-67	1	3
MGP_AJ_P0078625	RRM_1	PF00076.22	2.1e-67	2	3
MGP_AJ_P0078625	RRM_1	PF00076.22	2.1e-67	3	3
MGP_AJ_P0078626	RRM_1	PF00076.22	2.1e-67	1	3
MGP_AJ_P0078626	RRM_1	PF00076.22	2.1e-67	2	3
MGP_AJ_P0078626	RRM_1	PF00076.22	2.1e-67	3	3
MGP_AJ_P0078634	RRM_1	PF00076.22	2.3e-58	1	3
MGP_AJ_P0078634	RRM_1	PF00076.22	2.3e-58	2	3
MGP_AJ_P0078634	RRM_1	PF00076.22	2.3e-58	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0078643	-	2664	-	-	- (aa)	-	-
MGP_AJ_T0078642	-	1886	-	-	- (aa)	-	-
MGP_AJ_T0078641	-	823	-	-	- (aa)	-	-
MGP_AJ_T0078640	-	864	-	-	- (aa)	-	-
MGP_AJ_T0078647	-	627	-	-	- (aa)	-	-
MGP_AJ_T0078646	-	758	-	-	- (aa)	-	-
MGP_AJ_T0078645	-	750	-	-	- (aa)	-	-
MGP_AJ_T0078644	-	706	-	-	- (aa)	-	-
MGP_AJ_T0078649	-	2505	-	-	- (aa)	-	-
MGP_AJ_T0078648	-	877	-	-	- (aa)	-	-
MGP_AJ_T0078625	-	1789	XM_006505889	MGP_AJ_P0078625	385 (aa)	XP_006505952	P52912
MGP_AJ_T0078627	-	934	-	-	- (aa)	-	-
MGP_AJ_T0078626	-	4476	-	MGP_AJ_P0078626	386 (aa)	-	-
MGP_AJ_T0078651	-	585	-	-	- (aa)	-	-
MGP_AJ_T0078636	-	797	-	-	- (aa)	-	-
MGP_AJ_T0078637	-	4325	-	MGP_AJ_P0078637	212 (aa)	-	-
MGP_AJ_T0078634	-	1444	-	MGP_AJ_P0078634	285 (aa)	-	-
MGP_AJ_T0078635	-	1290	-	MGP_AJ_P0078635	93 (aa)	-	-
MGP_AJ_T0078632	-	3854	-	-	- (aa)	-	-
MGP_AJ_T0078633	-	3129	-	MGP_AJ_P0078633	375 (aa)	-	-
MGP_AJ_T0078630	-	612	-	-	- (aa)	-	-
MGP_AJ_T0078631	-	1203	-	MGP_AJ_P0078631	133 (aa)	-	-
MGP_AJ_T0078638	-	1178	-	-	- (aa)	-	-
MGP_AJ_T0078639	-	3107	-	MGP_AJ_P0078639	377 (aa)	-	-
MGP_AJ_T0078629	-	4420	-	-	- (aa)	-	-
MGP_AJ_T0078628	-	422	-	-	- (aa)	-	-
MGP_AJ_T0078652	-	597	-	MGP_AJ_P0078652	105 (aa)	-	-
MGP_AJ_T0078650	-	716	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0030941	Tia1	87	38.095	MGP_AJ_G0026800	Pabpc1l	59	38.095
MGP_AJ_G0030941	Tia1	95	33.835	MGP_AJ_G0024336	Pabpc2	57	35.443
MGP_AJ_G0030941	Tia1	77	35.870	MGP_AJ_G0027586	Rbm8a	54	35.870
MGP_AJ_G0030941	Tia1	84	34.247	MGP_AJ_G0036025	Pabpc5	93	33.333
MGP_AJ_G0030941	Tia1	83	35.443	MGP_AJ_G0025309	Celf2	51	35.443
MGP_AJ_G0030941	Tia1	98	32.895	MGP_AJ_G0028539	Elavl4	94	35.897
MGP_AJ_G0030941	Tia1	88	34.568	MGP_AJ_G0017538	Celf5	89	32.184
MGP_AJ_G0030941	Tia1	73	35.366	MGP_AJ_G0016823	-	53	35.870
MGP_AJ_G0030941	Tia1	95	30.000	MGP_AJ_G0027150	Pabpc4l	95	30.539
MGP_AJ_G0030941	Tia1	80	34.043	MGP_AJ_G0035731	Rbmx	98	34.409
MGP_AJ_G0030941	Tia1	87	38.095	MGP_AJ_G0021757	Pabpc1	57	38.095
MGP_AJ_G0030941	Tia1	69	32.308	MGP_AJ_G0029746	Hnrnpd	55	35.593
MGP_AJ_G0030941	Tia1	98	31.169	MGP_AJ_G0034452	Elavl3	90	37.179
MGP_AJ_G0030941	Tia1	70	41.333	MGP_AJ_G0035518	Rbm3	99	35.955
MGP_AJ_G0030941	Tia1	93	38.667	MGP_AJ_G0027512	Celf3	77	37.805
MGP_AJ_G0030941	Tia1	78	36.000	MGP_AJ_G0022690	Ncbp2	51	36.000
MGP_AJ_G0030941	Tia1	60	31.285	MGP_AJ_G0028827	Trnau1ap	79	30.198
MGP_AJ_G0030941	Tia1	96	36.905	MGP_AJ_G0023107	Pabpc6	58	36.905
MGP_AJ_G0030941	Tia1	76	36.364	MGP_AJ_G0033788	-	59	34.043
MGP_AJ_G0030941	Tia1	89	34.615	MGP_AJ_G0028407	Elavl2	96	34.615
MGP_AJ_G0030941	Tia1	87	32.911	MGP_AJ_G0024174	Celf4	63	30.682
MGP_AJ_G0030941	Tia1	80	37.778	MGP_AJ_G0017464	Cirbp	91	35.714
MGP_AJ_G0030941	Tia1	99	31.579	MGP_AJ_G0033314	Elavl1	95	32.298
MGP_AJ_G0030941	Tia1	85	36.000	MGP_AJ_G0034883	Celf6	62	32.955
MGP_AJ_G0030941	Tia1	97	86.992	MGP_AJ_G0033065	Tial1	100	87.440