EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AJ_G0030971 (Gene tree)
Gene ID: -
Gene Symbol: Rab7
Alias: Rab7a
Full Name: RAB7%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_aj
Status: putative
Strand: Minus strand
Length: 47999 bases
Position: chr6:85927700-85975698
Accession: 105068
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0078786	MMR_HSR1	PF01926.23	7.1e-07	1	1
MGP_AJ_P0078787	MMR_HSR1	PF01926.23	7.7e-07	1	1
MGP_AJ_P0078788	MMR_HSR1	PF01926.23	1.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0078786	-	1387	-	MGP_AJ_P0078786	207 (aa)	-	P51150
MGP_AJ_T0078787	-	550	-	MGP_AJ_P0078787	98 (aa)	-	-
MGP_AJ_T0078788	-	372	-	MGP_AJ_P0078788	79 (aa)	-	-

Gene Model

Click here to download MGP_AJ_G0030971's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AJ_G0030971's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0030971	Rab7	91	43.836	MGP_AJ_G0035677	Rab33a	85	36.111
MGP_AJ_G0030971	Rab7	90	48.864	MGP_AJ_G0024094	Rab18	92	36.082
MGP_AJ_G0030971	Rab7	76	33.121	MGP_AJ_G0031454	Kras	87	33.929
MGP_AJ_G0030971	Rab7	100	44.304	MGP_AJ_G0019824	Rab15	81	33.520
MGP_AJ_G0030971	Rab7	90	50.704	MGP_AJ_G0035173	Rab6b	94	36.683
MGP_AJ_G0030971	Rab7	90	50.704	MGP_AJ_G0023946	Rab12	64	36.316
MGP_AJ_G0030971	Rab7	91	45.833	MGP_AJ_G0023494	Rab11b	72	40.491
MGP_AJ_G0030971	Rab7	95	37.333	MGP_AJ_G0019530	Dnajc27	60	36.145
MGP_AJ_G0030971	Rab7	91	44.944	MGP_AJ_G0027364	Rab25	75	39.157
MGP_AJ_G0030971	Rab7	100	40.000	MGP_AJ_G0027158	Rab33b	79	36.559
MGP_AJ_G0030971	Rab7	94	43.478	MGP_AJ_G0015886	Rab23	70	33.918
MGP_AJ_G0030971	Rab7	97	35.789	MGP_AJ_G0031560	Rasl2-9	75	33.728
MGP_AJ_G0030971	Rab7	83	35.714	MGP_AJ_G0019178	Arl4d	58	32.520
MGP_AJ_G0030971	Rab7	90	50.704	MGP_AJ_G0023937	Rab31	82	44.512
MGP_AJ_G0030971	Rab7	91	44.944	MGP_AJ_G0027997	Rab2a	84	36.269
MGP_AJ_G0030971	Rab7	90	40.278	MGP_AJ_G0035849	Rab39b	76	34.545
MGP_AJ_G0030971	Rab7	90	49.296	MGP_AJ_G0026926	Rab22a	82	40.854
MGP_AJ_G0030971	Rab7	99	47.436	MGP_AJ_G0023847	Rab5a	81	40.782
MGP_AJ_G0030971	Rab7	79	31.169	MGP_AJ_G0035150	Mras	80	33.333
MGP_AJ_G0030971	Rab7	91	45.833	MGP_AJ_G0017327	Rab36	63	36.571
MGP_AJ_G0030971	Rab7	91	48.611	MGP_AJ_G0029939	Rab35	95	34.872
MGP_AJ_G0030971	Rab7	91	46.067	MGP_AJ_G0021251	Rab2b	91	36.634
MGP_AJ_G0030971	Rab7	91	45.833	MGP_AJ_G0025627	Rab14	83	40.310
MGP_AJ_G0030971	Rab7	90	49.296	MGP_AJ_G0019135	Rab5c	77	42.442
MGP_AJ_G0030971	Rab7	100	39.241	MGP_AJ_G0018037	Rab1a	78	39.264
MGP_AJ_G0030971	Rab7	66	32.117	MGP_AJ_G0033196	Hras	96	30.808
MGP_AJ_G0030971	Rab7	73	33.113	MGP_AJ_G0027648	Nras	95	33.108
MGP_AJ_G0030971	Rab7	95	62.667	MGP_AJ_G0036235	Rab9	88	54.237
MGP_AJ_G0030971	Rab7	97	63.636	MGP_AJ_G0036087	Rab9b	99	53.202
MGP_AJ_G0030971	Rab7	90	50.704	MGP_AJ_G0032548	Rab6a	94	36.000
MGP_AJ_G0030971	Rab7	91	45.833	MGP_AJ_G0032488	Rab30	88	38.043
MGP_AJ_G0030971	Rab7	95	53.947	MGP_AJ_G0019340	Rab37	76	41.071
MGP_AJ_G0030971	Rab7	100	39.241	MGP_AJ_G0024659	Rab1b	97	34.848
MGP_AJ_G0030971	Rab7	91	40.449	MGP_AJ_G0022200	Rabl2	71	33.735
MGP_AJ_G0030971	Rab7	91	45.833	MGP_AJ_G0034923	Rab11a	87	38.686