EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_AJ_G0031198 (Gene tree)
Gene ID
-
Gene Symbol
Apobec1
Alias
Cdar1
Full Name
apolipoprotein B mRNA editing enzyme%2C catalytic polypeptide 1
Gene Type
protein_coding
Species
Mus_musculus_aj
Status
putative
Strand
Minus strand
Length
25283 bases
Position
chr6:120917429-120942711
Accession
103298
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_AJ_P0079974APOBEC_NPF08210.118.3e-3011
MGP_AJ_P0079975APOBEC_NPF08210.118.3e-3011
MGP_AJ_P0079976APOBEC_NPF08210.118.3e-3011
MGP_AJ_P0079977APOBEC_NPF08210.114.2e-1711
MGP_AJ_P0079978APOBEC_NPF08210.113.1e-1311
MGP_AJ_P0079974APOBEC_CPF05240.141.8e-2211
MGP_AJ_P0079975APOBEC_CPF05240.141.8e-2211
MGP_AJ_P0079976APOBEC_CPF05240.141.8e-2211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_AJ_T0079978-775-MGP_AJ_P0079978113 (aa)--
MGP_AJ_T0079979-372-MGP_AJ_P007997943 (aa)--
MGP_AJ_T0079982-520--- (aa)--
MGP_AJ_T0079981-560--- (aa)--
MGP_AJ_T0079980-360-MGP_AJ_P007998025 (aa)--
MGP_AJ_T0079976-2127-MGP_AJ_P0079976229 (aa)--
MGP_AJ_T0079977-666-MGP_AJ_P0079977121 (aa)--
MGP_AJ_T0079974-2265XM_006505401MGP_AJ_P0079974229 (aa)XP_006505464P51908
MGP_AJ_T0079975-2072-MGP_AJ_P0079975229 (aa)--
Gene Model
Click here to download MGP_AJ_G0031198's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_AJ_G0031198's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_AJ_G0031198Apobec15639.706MGP_AJ_G0031197Aicda5341.509
MGP_AJ_G0031198Apobec17434.737MGP_AJ_G0022050Apobec38438.028

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