EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AJ_G0031796 (Gene tree)
Gene ID: -
Gene Symbol: Zfp235
Alias: 0610030O19Rik|AI428448
Full Name: zinc finger protein 235
Gene Type: protein_coding
Species: Mus_musculus_aj
Status: putative
Strand: Plus strand
Length: 9039 bases
Position: chr7:21883363-21892401
Accession: 1929117
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0082197	zf-C2H2	PF00096.26	1e-79	1	13
MGP_AJ_P0082197	zf-C2H2	PF00096.26	1e-79	2	13
MGP_AJ_P0082197	zf-C2H2	PF00096.26	1e-79	3	13
MGP_AJ_P0082197	zf-C2H2	PF00096.26	1e-79	4	13
MGP_AJ_P0082197	zf-C2H2	PF00096.26	1e-79	5	13
MGP_AJ_P0082197	zf-C2H2	PF00096.26	1e-79	6	13
MGP_AJ_P0082197	zf-C2H2	PF00096.26	1e-79	7	13
MGP_AJ_P0082197	zf-C2H2	PF00096.26	1e-79	8	13
MGP_AJ_P0082197	zf-C2H2	PF00096.26	1e-79	9	13
MGP_AJ_P0082197	zf-C2H2	PF00096.26	1e-79	10	13
MGP_AJ_P0082197	zf-C2H2	PF00096.26	1e-79	11	13
MGP_AJ_P0082197	zf-C2H2	PF00096.26	1e-79	12	13
MGP_AJ_P0082197	zf-C2H2	PF00096.26	1e-79	13	13
MGP_AJ_P0082197	zf-met	PF12874.7	3.4e-08	1	3
MGP_AJ_P0082197	zf-met	PF12874.7	3.4e-08	2	3
MGP_AJ_P0082197	zf-met	PF12874.7	3.4e-08	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0082196	-	998	-	-	- (aa)	-	-
MGP_AJ_T0082197	-	3346	-	MGP_AJ_P0082197	697 (aa)	-	-
MGP_AJ_T0082194	-	1849	-	-	- (aa)	-	-
MGP_AJ_T0082195	-	1270	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_AJ_G0031796's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AJ_G0031796's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0031796	Zfp235	67	40.316	MGP_AJ_G0031550	Zfp865	82	39.749
MGP_AJ_G0031796	Zfp235	79	58.140	MGP_AJ_G0018223	Zfp454	82	58.140
MGP_AJ_G0031796	Zfp235	69	36.504	MGP_AJ_G0026897	Zfp64	68	36.504
MGP_AJ_G0031796	Zfp235	62	56.115	MGP_AJ_G0033015	Zfp768	51	56.071
MGP_AJ_G0031796	Zfp235	99	48.879	MGP_AJ_G0033019	E430018J23Rik	86	49.339
MGP_AJ_G0031796	Zfp235	80	57.143	MGP_AJ_G0020619	Gm5141	95	57.143
MGP_AJ_G0031796	Zfp235	70	54.054	MGP_AJ_G0020653	Rslcan18	65	54.054
MGP_AJ_G0031796	Zfp235	62	38.095	MGP_AJ_G0031542	Zfp628	61	36.884
MGP_AJ_G0031796	Zfp235	70	52.880	MGP_AJ_G0031148	Zfp637	98	55.556
MGP_AJ_G0031796	Zfp235	73	48.193	MGP_AJ_G0020671	Zfp748	92	48.193
MGP_AJ_G0031796	Zfp235	100	56.447	MGP_AJ_G0031802	Zfp94	96	56.447
MGP_AJ_G0031796	Zfp235	73	75.901	MGP_AJ_G0031800	Zfp93	99	77.252
MGP_AJ_G0031796	Zfp235	100	53.957	MGP_AJ_G0031801	Zfp61	99	50.498
MGP_AJ_G0031796	Zfp235	99	47.291	MGP_AJ_G0026859	Zfp334	99	43.787
MGP_AJ_G0031796	Zfp235	74	51.938	MGP_AJ_G0020235	Zkscan4	65	51.938
MGP_AJ_G0031796	Zfp235	63	50.000	MGP_AJ_G0029473	Zbtb49	61	50.704
MGP_AJ_G0031796	Zfp235	73	57.098	MGP_AJ_G0021971	Zfp251	71	57.098
MGP_AJ_G0031796	Zfp235	76	48.159	MGP_AJ_G0034459	Zfp872	94	48.159
MGP_AJ_G0031796	Zfp235	67	43.411	MGP_AJ_G0024569	Zfp236	71	43.411
MGP_AJ_G0031796	Zfp235	79	58.537	MGP_AJ_G0034123	Zfp1	90	58.537
MGP_AJ_G0031796	Zfp235	73	56.553	MGP_AJ_G0031967	Zfp420	99	56.553
MGP_AJ_G0031796	Zfp235	99	51.276	MGP_AJ_G0032102	Zfp715	95	51.276
MGP_AJ_G0031796	Zfp235	61	47.436	MGP_AJ_G0023218	Zscan10	79	47.436
MGP_AJ_G0031796	Zfp235	100	44.469	MGP_AJ_G0023214	Zfp945	98	44.469
MGP_AJ_G0031796	Zfp235	99	65.466	MGP_AJ_G0031797	Zfp114	99	66.612
MGP_AJ_G0031796	Zfp235	100	61.398	MGP_AJ_G0031795	Zfp112	99	61.398
MGP_AJ_G0031796	Zfp235	62	37.240	MGP_AJ_G0033966	Zfp319	91	37.696
MGP_AJ_G0031796	Zfp235	71	44.248	MGP_AJ_G0029008	Zbtb17	62	42.949
MGP_AJ_G0031796	Zfp235	73	44.368	MGP_AJ_G0031904	Zfp974	92	44.368
MGP_AJ_G0031796	Zfp235	99	47.696	MGP_AJ_G0018368	Zfp867	96	47.696
MGP_AJ_G0031796	Zfp235	62	46.377	MGP_AJ_G0029808	Gfi1	100	48.031
MGP_AJ_G0031796	Zfp235	99	55.967	MGP_AJ_G0026427	Zfp661	95	55.967
MGP_AJ_G0031796	Zfp235	99	56.226	MGP_AJ_G0032098	Zfp141	96	56.226
MGP_AJ_G0031796	Zfp235	62	44.667	MGP_AJ_G0030671	Repin1	93	44.667
MGP_AJ_G0031796	Zfp235	99	48.244	MGP_AJ_G0023196	Zfp51	94	51.716
MGP_AJ_G0031796	Zfp235	63	51.852	MGP_AJ_G0031832	Zfp574	93	45.652
MGP_AJ_G0031796	Zfp235	99	49.492	MGP_AJ_G0023194	Zfp677	98	49.492
MGP_AJ_G0031796	Zfp235	70	45.023	MGP_AJ_G0020654	Zfp759	88	45.023
MGP_AJ_G0031796	Zfp235	69	39.608	MGP_AJ_G0030801	Prdm5	73	44.286
MGP_AJ_G0031796	Zfp235	84	48.125	MGP_AJ_G0033747	Zfp709	98	48.125
MGP_AJ_G0031796	Zfp235	100	43.544	MGP_AJ_G0033748	Zfp882	99	43.544
MGP_AJ_G0031796	Zfp235	64	41.667	MGP_AJ_G0018319	Zfp672	99	42.500
MGP_AJ_G0031796	Zfp235	65	48.503	MGP_AJ_G0027082	Mynn	50	48.503