EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AJ_G0031807 (Gene tree)
Gene ID: -
Gene Symbol: Irgc1
Alias: F630044M05Rik|Gm1102|Gm474|Ifgge|Iigp5|Irgc|LOC210145|LOC381989
Full Name: immunity-related GTPase family%2C cinema 1
Gene Type: protein_coding
Species: Mus_musculus_aj
Status: putative
Strand: Minus strand
Length: 20270 bases
Position: chr7:22234304-22254573
Accession: 2685948
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0082234	MMR_HSR1	PF01926.23	6.4e-06	1	1
MGP_AJ_P0082235	MMR_HSR1	PF01926.23	6.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0082237	-	661	-	-	- (aa)	-	-
MGP_AJ_T0082236	-	383	-	MGP_AJ_P0082236	82 (aa)	-	-
MGP_AJ_T0082235	-	1738	-	MGP_AJ_P0082235	463 (aa)	-	-
MGP_AJ_T0082234	-	1836	XM_006539708	MGP_AJ_P0082234	463 (aa)	XP_006539771	A0A0U1RQ16
MGP_AJ_T0082238	-	344	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_AJ_G0031807's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AJ_G0031807's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0031807	Irgc1	65	33.775	MGP_AJ_G0018315	Igtp	68	33.775
MGP_AJ_G0031807	Irgc1	62	32.526	MGP_AJ_G0018316	Irgm2	69	32.526
MGP_AJ_G0031807	Irgc1	71	30.183	MGP_AJ_G0018178	Irgm1	76	35.169
MGP_AJ_G0031807	Irgc1	68	41.401	MGP_AJ_G0018186	Ifi47	75	41.401
MGP_AJ_G0031807	Irgc1	82	34.987	MGP_AJ_G0018185	Tgtp2	89	34.987
MGP_AJ_G0031807	Irgc1	82	34.987	MGP_AJ_G0018184	Tgtp1	89	34.987
MGP_AJ_G0031807	Irgc1	50	42.241	MGP_AJ_G0024424	-	87	39.370
MGP_AJ_G0031807	Irgc1	82	34.211	MGP_AJ_G0024427	F830016B08Rik	88	34.211
MGP_AJ_G0031807	Irgc1	81	35.638	MGP_AJ_G0024426	Gm4841	91	34.353
MGP_AJ_G0031807	Irgc1	68	36.909	MGP_AJ_G0024425	Gm4951	77	36.909