EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AJ_G0031880 (Gene tree)
Gene ID: -
Gene Symbol: Snrpa
Alias: C430021M15Rik|Rnu1a-1|Rnu1a1|U1 snRNP|U1-A|U1A
Full Name: small nuclear ribonucleoprotein polypeptide A
Gene Type: protein_coding
Species: Mus_musculus_aj
Status: putative
Strand: Minus strand
Length: 9502 bases
Position: chr7:25200633-25210134
Accession: 1855690
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0082522	RRM_5	PF13893.6	4.8e-07	1	2
MGP_AJ_P0082522	RRM_5	PF13893.6	4.8e-07	2	2
MGP_AJ_P0082523	RRM_5	PF13893.6	4.8e-07	1	2
MGP_AJ_P0082523	RRM_5	PF13893.6	4.8e-07	2	2
MGP_AJ_P0082524	RRM_5	PF13893.6	4.8e-07	1	2
MGP_AJ_P0082524	RRM_5	PF13893.6	4.8e-07	2	2
MGP_AJ_P0082522	RRM_1	PF00076.22	4.5e-28	1	2
MGP_AJ_P0082522	RRM_1	PF00076.22	4.5e-28	2	2
MGP_AJ_P0082523	RRM_1	PF00076.22	4.5e-28	1	2
MGP_AJ_P0082523	RRM_1	PF00076.22	4.5e-28	2	2
MGP_AJ_P0082524	RRM_1	PF00076.22	4.5e-28	1	2
MGP_AJ_P0082524	RRM_1	PF00076.22	4.5e-28	2	2
MGP_AJ_P0082525	RRM_1	PF00076.22	1.1e-18	1	2
MGP_AJ_P0082525	RRM_1	PF00076.22	1.1e-18	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0082527	-	1690	-	-	- (aa)	-	-
MGP_AJ_T0082526	-	510	-	MGP_AJ_P0082526	44 (aa)	-	-
MGP_AJ_T0082525	-	968	-	MGP_AJ_P0082525	247 (aa)	-	-
MGP_AJ_T0082524	-	1365	-	MGP_AJ_P0082524	287 (aa)	-	-
MGP_AJ_T0082523	-	1336	-	MGP_AJ_P0082523	287 (aa)	-	-
MGP_AJ_T0082522	-	1288	-	MGP_AJ_P0082522	287 (aa)	-	-
MGP_AJ_T0082521	-	509	-	-	- (aa)	-	-

Gene Model

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Protein-Protein Interaction (PPI)

Clik here to download MGP_AJ_G0031880's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0031880	Snrpa	97	55.235	MGP_AJ_G0026538	Snrpb2	99	63.121
MGP_AJ_G0031880	Snrpa	99	90.141	MGP_AJ_G0023177	Gm5145	100	90.141