EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AJ_G0031940 (Gene tree)
Gene ID: -
Gene Symbol: Hnrnpl
Alias: C79783|D830027H13Rik|Hnrpl
Full Name: heterogeneous nuclear ribonucleoprotein L
Gene Type: protein_coding
Species: Mus_musculus_aj
Status: putative
Strand: Plus strand
Length: 13719 bases
Position: chr7:26958031-26971749
Accession: 104816
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0082750	RRM_5	PF13893.6	2.4e-60	1	2
MGP_AJ_P0082750	RRM_5	PF13893.6	2.4e-60	2	2
MGP_AJ_P0082754	RRM_5	PF13893.6	2.4e-60	1	2
MGP_AJ_P0082754	RRM_5	PF13893.6	2.4e-60	2	2
MGP_AJ_P0082755	RRM_5	PF13893.6	2.9e-60	1	2
MGP_AJ_P0082755	RRM_5	PF13893.6	2.9e-60	2	2
MGP_AJ_P0082752	RRM_5	PF13893.6	1.9e-59	1	2
MGP_AJ_P0082752	RRM_5	PF13893.6	1.9e-59	2	2
MGP_AJ_P0082750	RRM_1	PF00076.22	3.3e-22	1	2
MGP_AJ_P0082750	RRM_1	PF00076.22	3.3e-22	2	2
MGP_AJ_P0082754	RRM_1	PF00076.22	3.3e-22	1	2
MGP_AJ_P0082754	RRM_1	PF00076.22	3.3e-22	2	2
MGP_AJ_P0082755	RRM_1	PF00076.22	4.2e-22	1	2
MGP_AJ_P0082755	RRM_1	PF00076.22	4.2e-22	2	2
MGP_AJ_P0082752	RRM_1	PF00076.22	1.6e-16	1	1
MGP_AJ_P0082753	RRM_1	PF00076.22	1.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0082754	-	2142	-	MGP_AJ_P0082754	586 (aa)	-	-
MGP_AJ_T0082755	-	2180	-	MGP_AJ_P0082755	614 (aa)	-	-
MGP_AJ_T0082756	-	2425	-	-	- (aa)	-	-
MGP_AJ_T0082757	-	1850	-	MGP_AJ_P0082757	201 (aa)	-	-
MGP_AJ_T0082750	-	2679	XM_006539556	MGP_AJ_P0082750	586 (aa)	XP_006539619	Q8R081
MGP_AJ_T0082751	-	2274	-	-	- (aa)	-	-
MGP_AJ_T0082752	-	1898	-	MGP_AJ_P0082752	456 (aa)	-	-
MGP_AJ_T0082753	-	502	-	MGP_AJ_P0082753	112 (aa)	-	-
MGP_AJ_T0082758	-	504	-	-	- (aa)	-	-
MGP_AJ_T0082759	-	643	-	-	- (aa)	-	-
MGP_AJ_T0082762	-	672	-	-	- (aa)	-	-
MGP_AJ_T0082760	-	1087	-	-	- (aa)	-	-
MGP_AJ_T0082761	-	768	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_AJ_G0031940's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AJ_G0031940's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0031940	Hnrnpl	95	30.045	MGP_AJ_G0017441	Ptbp1	80	30.583
MGP_AJ_G0031940	Hnrnpl	55	36.207	MGP_AJ_G0028297	Ptbp3	83	35.537
MGP_AJ_G0031940	Hnrnpl	77	30.645	MGP_AJ_G0027784	Ptbp2	77	30.645
MGP_AJ_G0031940	Hnrnpl	100	63.393	MGP_AJ_G0024012	Hnrnpll	79	58.065