EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AJ_G0032488 (Gene tree)
Gene ID: -
Gene Symbol: Rab30
Alias: 5033421K01Rik|AI323892|Rsb30
Full Name: RAB30%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_aj
Status: putative
Strand: Plus strand
Length: 89496 bases
Position: chr7:92926275-93015770
Accession: 1923235
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0085048	MMR_HSR1	PF01926.23	2.4e-05	1	1
MGP_AJ_P0085049	MMR_HSR1	PF01926.23	2.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0085049	-	1406	-	MGP_AJ_P0085049	203 (aa)	-	-
MGP_AJ_T0085048	-	2038	XM_006508293	MGP_AJ_P0085048	203 (aa)	XP_006508356	Q923S9
MGP_AJ_T0085050	-	1304	-	MGP_AJ_P0085050	175 (aa)	-	-

Gene Model

Click here to download MGP_AJ_G0032488's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AJ_G0032488's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0032488	Rab30	79	34.756	MGP_AJ_G0022200	Rabl2	70	34.756
MGP_AJ_G0032488	Rab30	81	47.059	MGP_AJ_G0027158	Rab33b	74	47.059
MGP_AJ_G0032488	Rab30	83	47.929	MGP_AJ_G0024094	Rab18	82	47.929
MGP_AJ_G0032488	Rab30	76	42.857	MGP_AJ_G0023937	Rab31	79	42.857
MGP_AJ_G0032488	Rab30	82	50.602	MGP_AJ_G0018037	Rab1a	81	50.602
MGP_AJ_G0032488	Rab30	80	48.466	MGP_AJ_G0019340	Rab37	75	48.466
MGP_AJ_G0032488	Rab30	87	33.146	MGP_AJ_G0031454	Kras	93	33.146
MGP_AJ_G0032488	Rab30	86	42.529	MGP_AJ_G0019824	Rab15	82	42.529
MGP_AJ_G0032488	Rab30	78	48.447	MGP_AJ_G0035849	Rab39b	76	48.447
MGP_AJ_G0032488	Rab30	97	37.981	MGP_AJ_G0034923	Rab11a	91	44.604
MGP_AJ_G0032488	Rab30	97	41.546	MGP_AJ_G0027364	Rab25	96	41.546
MGP_AJ_G0032488	Rab30	84	34.503	MGP_AJ_G0027648	Nras	96	34.932
MGP_AJ_G0032488	Rab30	88	47.778	MGP_AJ_G0023946	Rab12	62	47.778
MGP_AJ_G0032488	Rab30	84	45.614	MGP_AJ_G0021251	Rab2b	81	48.718
MGP_AJ_G0032488	Rab30	81	51.176	MGP_AJ_G0035677	Rab33a	72	51.176
MGP_AJ_G0032488	Rab30	78	38.272	MGP_AJ_G0017327	Rab36	61	38.272
MGP_AJ_G0032488	Rab30	95	38.889	MGP_AJ_G0036235	Rab9	97	38.889
MGP_AJ_G0032488	Rab30	86	43.678	MGP_AJ_G0023847	Rab5a	81	43.678
MGP_AJ_G0032488	Rab30	81	32.317	MGP_AJ_G0031560	Rasl2-9	75	32.317
MGP_AJ_G0032488	Rab30	79	41.615	MGP_AJ_G0035173	Rab6b	77	41.615
MGP_AJ_G0032488	Rab30	83	42.012	MGP_AJ_G0019135	Rab5c	78	42.012
MGP_AJ_G0032488	Rab30	81	33.735	MGP_AJ_G0035150	Mras	79	33.735
MGP_AJ_G0032488	Rab30	80	42.331	MGP_AJ_G0026926	Rab22a	84	42.331
MGP_AJ_G0032488	Rab30	77	35.625	MGP_AJ_G0018734	Rab34	62	35.625
MGP_AJ_G0032488	Rab30	79	39.157	MGP_AJ_G0036087	Rab9b	82	39.157
MGP_AJ_G0032488	Rab30	89	40.556	MGP_AJ_G0025627	Rab14	91	43.478
MGP_AJ_G0032488	Rab30	97	39.524	MGP_AJ_G0023494	Rab11b	96	39.524
MGP_AJ_G0032488	Rab30	89	34.426	MGP_AJ_G0033196	Hras	94	34.426
MGP_AJ_G0032488	Rab30	90	42.391	MGP_AJ_G0027997	Rab2a	87	42.391
MGP_AJ_G0032488	Rab30	86	50.286	MGP_AJ_G0029939	Rab35	86	50.286
MGP_AJ_G0032488	Rab30	87	37.500	MGP_AJ_G0015886	Rab23	74	37.500
MGP_AJ_G0032488	Rab30	82	31.737	MGP_AJ_G0029322	Rheb	88	31.737
MGP_AJ_G0032488	Rab30	82	50.000	MGP_AJ_G0024659	Rab1b	83	50.000
MGP_AJ_G0032488	Rab30	79	42.857	MGP_AJ_G0032548	Rab6a	77	42.857
MGP_AJ_G0032488	Rab30	88	38.043	MGP_AJ_G0030971	Rab7	91	45.833