EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AJ_G0033009 (Gene tree)
Gene ID: -
Gene Symbol: Sept1
Alias: Diff6|PNUTL3|Pnutl3
Full Name: septin 1
Gene Type: protein_coding
Species: Mus_musculus_aj
Status: putative
Strand: Minus strand
Length: 18607 bases
Position: chr7:128046110-128064716
Accession: 1858916
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0086824	MMR_HSR1	PF01926.23	2e-08	1	1
MGP_AJ_P0086823	MMR_HSR1	PF01926.23	3.4e-08	1	1
MGP_AJ_P0086821	MMR_HSR1	PF01926.23	4.9e-08	1	1
MGP_AJ_P0086820	MMR_HSR1	PF01926.23	5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0086819	-	594	-	-	- (aa)	-	-
MGP_AJ_T0086822	-	789	-	-	- (aa)	-	-
MGP_AJ_T0086823	-	706	-	MGP_AJ_P0086823	186 (aa)	-	-
MGP_AJ_T0086820	-	1101	-	MGP_AJ_P0086820	366 (aa)	-	-
MGP_AJ_T0086821	-	1048	-	MGP_AJ_P0086821	328 (aa)	-	-
MGP_AJ_T0086826	-	242	-	-	- (aa)	-	-
MGP_AJ_T0086827	-	709	-	-	- (aa)	-	-
MGP_AJ_T0086824	-	599	-	MGP_AJ_P0086824	145 (aa)	-	-
MGP_AJ_T0086825	-	821	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_AJ_G0033009's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AJ_G0033009's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0033009	Sept1	100	66.897	MGP_AJ_G0018873	Sept4	94	66.514
MGP_AJ_G0033009	Sept1	100	50.000	MGP_AJ_G0019414	Sept9	83	46.000
MGP_AJ_G0033009	Sept1	100	40.816	MGP_AJ_G0029724	Sept11	76	40.762
MGP_AJ_G0033009	Sept1	100	59.310	MGP_AJ_G0034475	Sept7	76	50.291
MGP_AJ_G0033009	Sept1	100	68.276	MGP_AJ_G0022577	Sept5	93	63.068
MGP_AJ_G0033009	Sept1	100	43.537	MGP_AJ_G0017230	Sept10	71	40.064
MGP_AJ_G0033009	Sept1	100	40.136	MGP_AJ_G0035605	Sept6	76	41.349
MGP_AJ_G0033009	Sept1	100	64.828	MGP_AJ_G0016324	Sept2	100	60.748
MGP_AJ_G0033009	Sept1	100	38.095	MGP_AJ_G0018267	Sept8	76	36.795
MGP_AJ_G0033009	Sept1	100	50.685	MGP_AJ_G0022100	Sept3	86	46.575
MGP_AJ_G0033009	Sept1	100	47.260	MGP_AJ_G0022441	Sept12	77	43.775