EuRBPDB

Description

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0087099	RRM_1	PF00076.22	2.2e-63	1	3
MGP_AJ_P0087099	RRM_1	PF00076.22	2.2e-63	2	3
MGP_AJ_P0087099	RRM_1	PF00076.22	2.2e-63	3	3
MGP_AJ_P0087103	RRM_1	PF00076.22	2.2e-63	1	3
MGP_AJ_P0087103	RRM_1	PF00076.22	2.2e-63	2	3
MGP_AJ_P0087103	RRM_1	PF00076.22	2.2e-63	3	3
MGP_AJ_P0087096	RRM_1	PF00076.22	3.1e-60	1	3
MGP_AJ_P0087096	RRM_1	PF00076.22	3.1e-60	2	3
MGP_AJ_P0087096	RRM_1	PF00076.22	3.1e-60	3	3
MGP_AJ_P0087098	RRM_1	PF00076.22	7.6e-51	1	3
MGP_AJ_P0087098	RRM_1	PF00076.22	7.6e-51	2	3
MGP_AJ_P0087098	RRM_1	PF00076.22	7.6e-51	3	3
MGP_AJ_P0087104	RRM_1	PF00076.22	1.8e-26	1	2
MGP_AJ_P0087104	RRM_1	PF00076.22	1.8e-26	2	2
MGP_AJ_P0087102	RRM_1	PF00076.22	2.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0087108	-	1808	-	-	- (aa)	-	-
MGP_AJ_T0087109	-	674	-	-	- (aa)	-	-
MGP_AJ_T0087102	-	562	-	MGP_AJ_P0087102	107 (aa)	-	-
MGP_AJ_T0087103	-	1580	-	MGP_AJ_P0087103	375 (aa)	-	-
MGP_AJ_T0087100	-	953	-	MGP_AJ_P0087100	106 (aa)	-	-
MGP_AJ_T0087101	-	2319	-	MGP_AJ_P0087101	135 (aa)	-	-
MGP_AJ_T0087106	-	560	-	-	- (aa)	-	-
MGP_AJ_T0087107	-	804	-	MGP_AJ_P0087107	140 (aa)	-	-
MGP_AJ_T0087104	-	1344	-	MGP_AJ_P0087104	244 (aa)	-	-
MGP_AJ_T0087105	-	784	-	MGP_AJ_P0087105	41 (aa)	-	-
MGP_AJ_T0087098	-	2835	-	MGP_AJ_P0087098	336 (aa)	-	-
MGP_AJ_T0087099	-	2033	-	MGP_AJ_P0087099	375 (aa)	-	-
MGP_AJ_T0087096	-	4447	XM_006507570	MGP_AJ_P0087096	392 (aa)	XP_006507633	P70318
MGP_AJ_T0087097	-	4262	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0033065	Tial1	65	31.481	MGP_AJ_G0025309	Celf2	61	34.177
MGP_AJ_G0033065	Tial1	81	31.111	MGP_AJ_G0019438	Rbfox3	53	31.868
MGP_AJ_G0033065	Tial1	73	35.897	MGP_AJ_G0028539	Elavl4	88	35.897
MGP_AJ_G0033065	Tial1	64	31.461	MGP_AJ_G0033788	-	60	31.915
MGP_AJ_G0033065	Tial1	100	87.440	MGP_AJ_G0030941	Tia1	97	86.992
MGP_AJ_G0033065	Tial1	73	37.179	MGP_AJ_G0034452	Elavl3	90	37.179
MGP_AJ_G0033065	Tial1	64	31.461	MGP_AJ_G0035731	Rbmx	90	32.258
MGP_AJ_G0033065	Tial1	67	30.769	MGP_AJ_G0033314	Elavl1	95	30.769
MGP_AJ_G0033065	Tial1	81	37.333	MGP_AJ_G0027512	Celf3	70	34.091
MGP_AJ_G0033065	Tial1	92	32.500	MGP_AJ_G0024336	Pabpc2	50	35.036
MGP_AJ_G0033065	Tial1	69	31.469	MGP_AJ_G0029933	Msi1	56	41.379
MGP_AJ_G0033065	Tial1	72	34.615	MGP_AJ_G0028407	Elavl2	93	34.615
MGP_AJ_G0033065	Tial1	73	32.000	MGP_AJ_G0027293	Rbm46	52	30.000
MGP_AJ_G0033065	Tial1	94	31.008	MGP_AJ_G0021757	Pabpc1	56	34.783
MGP_AJ_G0033065	Tial1	73	33.019	MGP_AJ_G0028827	Trnau1ap	60	32.386
MGP_AJ_G0033065	Tial1	67	40.244	MGP_AJ_G0017464	Cirbp	85	40.244
MGP_AJ_G0033065	Tial1	94	31.783	MGP_AJ_G0023107	Pabpc6	56	34.014
MGP_AJ_G0033065	Tial1	62	32.184	MGP_AJ_G0022690	Ncbp2	71	33.333
MGP_AJ_G0033065	Tial1	53	32.143	MGP_AJ_G0034883	Celf6	54	31.818
MGP_AJ_G0033065	Tial1	99	31.618	MGP_AJ_G0027150	Pabpc4l	94	33.333