EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AJ_G0033447 (Gene tree)
Gene ID: -
Gene Symbol: Zmat4
Alias: 9630048M01Rik
Full Name: zinc finger%2C matrin type 4
Gene Type: protein_coding
Species: Mus_musculus_aj
Status: putative
Strand: Plus strand
Length: 521358 bases
Position: chr8:20834530-21355887
Accession: 2443497
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0088485	zf-met	PF12874.7	2.9e-27	1	4
MGP_AJ_P0088485	zf-met	PF12874.7	2.9e-27	2	4
MGP_AJ_P0088485	zf-met	PF12874.7	2.9e-27	3	4
MGP_AJ_P0088485	zf-met	PF12874.7	2.9e-27	4	4
MGP_AJ_P0088484	zf-met	PF12874.7	8.9e-13	1	2
MGP_AJ_P0088484	zf-met	PF12874.7	8.9e-13	2	2
MGP_AJ_P0088487	zf-met	PF12874.7	3.1e-06	1	1
MGP_AJ_P0088485	zf-C2H2_jaz	PF12171.8	4.8e-23	1	2
MGP_AJ_P0088485	zf-C2H2_jaz	PF12171.8	4.8e-23	2	2
MGP_AJ_P0088484	zf-C2H2_jaz	PF12171.8	2.5e-09	1	1
MGP_AJ_P0088487	zf-C2H2_jaz	PF12171.8	9.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0088488	-	348	-	-	- (aa)	-	-
MGP_AJ_T0088486	-	2272	-	MGP_AJ_P0088486	225 (aa)	-	-
MGP_AJ_T0088487	-	454	-	MGP_AJ_P0088487	68 (aa)	-	-
MGP_AJ_T0088484	-	367	XM_006509139	MGP_AJ_P0088484	96 (aa)	XP_006509202	Q8BZ94
MGP_AJ_T0088485	-	4182	-	MGP_AJ_P0088485	229 (aa)	-	-

Gene Model

Click here to download MGP_AJ_G0033447's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AJ_G0033447's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0033447	Zmat4	94	50.549	MGP_AJ_G0020539	Zfp346	75	44.022
MGP_AJ_G0033447	Zmat4	84	35.172	MGP_AJ_G0027095	Zmat3	74	35.172