EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AJ_G0034123 (Gene tree)
Gene ID: -
Gene Symbol: Zfp1
Alias: Fnp-1|Zfp-1|mkr-1
Full Name: zinc finger protein 1
Gene Type: protein_coding
Species: Mus_musculus_aj
Status: putative
Strand: Plus strand
Length: 27297 bases
Position: chr8:109787175-109814471
Accession: 99154
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0090612	zf-C2H2	PF00096.26	2.2e-51	1	8
MGP_AJ_P0090612	zf-C2H2	PF00096.26	2.2e-51	2	8
MGP_AJ_P0090612	zf-C2H2	PF00096.26	2.2e-51	3	8
MGP_AJ_P0090612	zf-C2H2	PF00096.26	2.2e-51	4	8
MGP_AJ_P0090612	zf-C2H2	PF00096.26	2.2e-51	5	8
MGP_AJ_P0090612	zf-C2H2	PF00096.26	2.2e-51	6	8
MGP_AJ_P0090612	zf-C2H2	PF00096.26	2.2e-51	7	8
MGP_AJ_P0090612	zf-C2H2	PF00096.26	2.2e-51	8	8
MGP_AJ_P0090612	zf-met	PF12874.7	3.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0090612	-	1871	XM_011248348	MGP_AJ_P0090612	403 (aa)	XP_011246650	Q3UI68

Gene Model

Click here to download MGP_AJ_G0034123's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AJ_G0034123's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0034123	Zfp1	99	41.500	MGP_AJ_G0020619	Gm5141	92	41.500
MGP_AJ_G0034123	Zfp1	64	43.137	MGP_AJ_G0026897	Zfp64	70	43.137
MGP_AJ_G0034123	Zfp1	75	54.491	MGP_AJ_G0020235	Zkscan4	53	54.491
MGP_AJ_G0034123	Zfp1	68	46.071	MGP_AJ_G0033747	Zfp709	86	46.914
MGP_AJ_G0034123	Zfp1	99	42.769	MGP_AJ_G0033748	Zfp882	99	45.349
MGP_AJ_G0034123	Zfp1	79	40.594	MGP_AJ_G0031832	Zfp574	71	40.594
MGP_AJ_G0034123	Zfp1	60	43.478	MGP_AJ_G0029808	Gfi1	100	46.457
MGP_AJ_G0034123	Zfp1	77	57.042	MGP_AJ_G0031148	Zfp637	91	57.042
MGP_AJ_G0034123	Zfp1	79	46.460	MGP_AJ_G0023218	Zscan10	83	46.053
MGP_AJ_G0034123	Zfp1	99	52.036	MGP_AJ_G0023214	Zfp945	99	52.036
MGP_AJ_G0034123	Zfp1	98	49.145	MGP_AJ_G0020671	Zfp748	99	49.145
MGP_AJ_G0034123	Zfp1	78	57.692	MGP_AJ_G0031967	Zfp420	99	57.692
MGP_AJ_G0034123	Zfp1	60	46.429	MGP_AJ_G0031542	Zfp628	60	46.073
MGP_AJ_G0034123	Zfp1	99	47.926	MGP_AJ_G0023196	Zfp51	94	47.926
MGP_AJ_G0034123	Zfp1	99	45.076	MGP_AJ_G0023194	Zfp677	99	52.263
MGP_AJ_G0034123	Zfp1	67	42.083	MGP_AJ_G0029008	Zbtb17	54	46.512
MGP_AJ_G0034123	Zfp1	98	35.381	MGP_AJ_G0033019	E430018J23Rik	86	35.381
MGP_AJ_G0034123	Zfp1	80	52.252	MGP_AJ_G0033015	Zfp768	51	52.018
MGP_AJ_G0034123	Zfp1	99	48.828	MGP_AJ_G0018223	Zfp454	98	48.828
MGP_AJ_G0034123	Zfp1	98	50.185	MGP_AJ_G0031802	Zfp94	96	50.185
MGP_AJ_G0034123	Zfp1	78	61.905	MGP_AJ_G0031801	Zfp61	60	61.905
MGP_AJ_G0034123	Zfp1	80	49.309	MGP_AJ_G0031800	Zfp93	90	49.309
MGP_AJ_G0034123	Zfp1	98	45.113	MGP_AJ_G0034459	Zfp872	99	45.113
MGP_AJ_G0034123	Zfp1	67	39.791	MGP_AJ_G0031550	Zfp865	80	39.286
MGP_AJ_G0034123	Zfp1	98	47.059	MGP_AJ_G0021971	Zfp251	94	47.059
MGP_AJ_G0034123	Zfp1	99	50.000	MGP_AJ_G0032098	Zfp141	97	50.000
MGP_AJ_G0034123	Zfp1	67	53.077	MGP_AJ_G0031797	Zfp114	61	53.077
MGP_AJ_G0034123	Zfp1	90	58.537	MGP_AJ_G0031796	Zfp235	79	58.537
MGP_AJ_G0034123	Zfp1	80	57.078	MGP_AJ_G0031795	Zfp112	57	57.078
MGP_AJ_G0034123	Zfp1	100	42.617	MGP_AJ_G0026859	Zfp334	99	54.028
MGP_AJ_G0034123	Zfp1	67	46.559	MGP_AJ_G0018319	Zfp672	90	46.559
MGP_AJ_G0034123	Zfp1	98	38.214	MGP_AJ_G0020654	Zfp759	99	38.214
MGP_AJ_G0034123	Zfp1	99	48.548	MGP_AJ_G0020653	Rslcan18	86	48.548
MGP_AJ_G0034123	Zfp1	75	45.556	MGP_AJ_G0031904	Zfp974	86	45.556
MGP_AJ_G0034123	Zfp1	67	45.652	MGP_AJ_G0024569	Zfp236	60	45.652
MGP_AJ_G0034123	Zfp1	63	49.485	MGP_AJ_G0029473	Zbtb49	76	48.611
MGP_AJ_G0034123	Zfp1	98	41.429	MGP_AJ_G0026427	Zfp661	96	41.429
MGP_AJ_G0034123	Zfp1	75	40.183	MGP_AJ_G0033966	Zfp319	90	40.183
MGP_AJ_G0034123	Zfp1	98	51.440	MGP_AJ_G0032102	Zfp715	95	51.440
MGP_AJ_G0034123	Zfp1	99	39.175	MGP_AJ_G0018368	Zfp867	95	39.600
MGP_AJ_G0034123	Zfp1	63	42.424	MGP_AJ_G0030671	Repin1	92	42.424
MGP_AJ_G0034123	Zfp1	67	40.167	MGP_AJ_G0030801	Prdm5	67	50.847