EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AJ_G0034459 (Gene tree)
Gene ID: -
Gene Symbol: Zfp872
Alias: 9530015I07Rik
Full Name: zinc finger protein 872
Gene Type: protein_coding
Species: Mus_musculus_aj
Status: putative
Strand: Plus strand
Length: 13053 bases
Position: chr9:19090608-19103660
Accession: 3588272
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0091574	zf-C2H2	PF00096.26	6.2e-50	1	9
MGP_AJ_P0091574	zf-C2H2	PF00096.26	6.2e-50	2	9
MGP_AJ_P0091574	zf-C2H2	PF00096.26	6.2e-50	3	9
MGP_AJ_P0091574	zf-C2H2	PF00096.26	6.2e-50	4	9
MGP_AJ_P0091574	zf-C2H2	PF00096.26	6.2e-50	5	9
MGP_AJ_P0091574	zf-C2H2	PF00096.26	6.2e-50	6	9
MGP_AJ_P0091574	zf-C2H2	PF00096.26	6.2e-50	7	9
MGP_AJ_P0091574	zf-C2H2	PF00096.26	6.2e-50	8	9
MGP_AJ_P0091574	zf-C2H2	PF00096.26	6.2e-50	9	9
MGP_AJ_P0091573	zf-C2H2	PF00096.26	6.4e-50	1	9
MGP_AJ_P0091573	zf-C2H2	PF00096.26	6.4e-50	2	9
MGP_AJ_P0091573	zf-C2H2	PF00096.26	6.4e-50	3	9
MGP_AJ_P0091573	zf-C2H2	PF00096.26	6.4e-50	4	9
MGP_AJ_P0091573	zf-C2H2	PF00096.26	6.4e-50	5	9
MGP_AJ_P0091573	zf-C2H2	PF00096.26	6.4e-50	6	9
MGP_AJ_P0091573	zf-C2H2	PF00096.26	6.4e-50	7	9
MGP_AJ_P0091573	zf-C2H2	PF00096.26	6.4e-50	8	9
MGP_AJ_P0091573	zf-C2H2	PF00096.26	6.4e-50	9	9
MGP_AJ_P0091574	zf-met	PF12874.7	9e-05	1	1
MGP_AJ_P0091573	zf-met	PF12874.7	9.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0091573	-	2958	-	MGP_AJ_P0091573	465 (aa)	-	F7APL9
MGP_AJ_T0091574	-	1395	-	MGP_AJ_P0091574	464 (aa)	-	-

Gene Model

Click here to download MGP_AJ_G0034459's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AJ_G0034459's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0034459	Zfp872	99	45.113	MGP_AJ_G0034123	Zfp1	98	45.113
MGP_AJ_G0034459	Zfp872	82	34.140	MGP_AJ_G0033966	Zfp319	90	34.722
MGP_AJ_G0034459	Zfp872	95	51.220	MGP_AJ_G0032102	Zfp715	75	51.220
MGP_AJ_G0034459	Zfp872	84	46.226	MGP_AJ_G0031832	Zfp574	93	46.226
MGP_AJ_G0034459	Zfp872	99	45.773	MGP_AJ_G0023194	Zfp677	98	45.773
MGP_AJ_G0034459	Zfp872	99	43.702	MGP_AJ_G0023196	Zfp51	94	44.444
MGP_AJ_G0034459	Zfp872	94	40.800	MGP_AJ_G0024569	Zfp236	62	44.318
MGP_AJ_G0034459	Zfp872	83	41.964	MGP_AJ_G0029008	Zbtb17	56	42.638
MGP_AJ_G0034459	Zfp872	99	47.684	MGP_AJ_G0020671	Zfp748	99	48.459
MGP_AJ_G0034459	Zfp872	96	53.982	MGP_AJ_G0031148	Zfp637	88	53.982
MGP_AJ_G0034459	Zfp872	86	53.608	MGP_AJ_G0031967	Zfp420	99	54.233
MGP_AJ_G0034459	Zfp872	99	53.571	MGP_AJ_G0021971	Zfp251	68	54.027
MGP_AJ_G0034459	Zfp872	99	42.211	MGP_AJ_G0026859	Zfp334	99	41.928
MGP_AJ_G0034459	Zfp872	81	47.191	MGP_AJ_G0031542	Zfp628	60	46.114
MGP_AJ_G0034459	Zfp872	99	50.152	MGP_AJ_G0020619	Gm5141	100	50.784
MGP_AJ_G0034459	Zfp872	84	48.162	MGP_AJ_G0033015	Zfp768	51	47.426
MGP_AJ_G0034459	Zfp872	86	42.742	MGP_AJ_G0031904	Zfp974	87	44.828
MGP_AJ_G0034459	Zfp872	87	38.342	MGP_AJ_G0018955	Zfp652	69	36.054
MGP_AJ_G0034459	Zfp872	99	50.284	MGP_AJ_G0033748	Zfp882	97	44.809
MGP_AJ_G0034459	Zfp872	99	53.876	MGP_AJ_G0032098	Zfp141	96	54.435
MGP_AJ_G0034459	Zfp872	84	44.156	MGP_AJ_G0031550	Zfp865	78	35.776
MGP_AJ_G0034459	Zfp872	99	43.333	MGP_AJ_G0023214	Zfp945	95	44.904
MGP_AJ_G0034459	Zfp872	97	39.935	MGP_AJ_G0023218	Zscan10	80	39.935
MGP_AJ_G0034459	Zfp872	99	53.333	MGP_AJ_G0018368	Zfp867	95	53.407
MGP_AJ_G0034459	Zfp872	99	40.530	MGP_AJ_G0030801	Prdm5	82	40.076
MGP_AJ_G0034459	Zfp872	80	34.050	MGP_AJ_G0026897	Zfp64	71	34.082
MGP_AJ_G0034459	Zfp872	99	40.755	MGP_AJ_G0033019	E430018J23Rik	86	41.045
MGP_AJ_G0034459	Zfp872	80	41.477	MGP_AJ_G0029808	Gfi1	100	44.030
MGP_AJ_G0034459	Zfp872	80	44.330	MGP_AJ_G0029473	Zbtb49	78	44.444
MGP_AJ_G0034459	Zfp872	99	48.746	MGP_AJ_G0026427	Zfp661	94	48.507
MGP_AJ_G0034459	Zfp872	99	46.667	MGP_AJ_G0018223	Zfp454	98	46.667
MGP_AJ_G0034459	Zfp872	86	51.672	MGP_AJ_G0031795	Zfp112	69	52.038
MGP_AJ_G0034459	Zfp872	84	48.852	MGP_AJ_G0031797	Zfp114	56	49.000
MGP_AJ_G0034459	Zfp872	94	48.159	MGP_AJ_G0031796	Zfp235	76	48.159
MGP_AJ_G0034459	Zfp872	96	33.159	MGP_AJ_G0030671	Repin1	98	33.159
MGP_AJ_G0034459	Zfp872	93	34.726	MGP_AJ_G0018319	Zfp672	100	40.000
MGP_AJ_G0034459	Zfp872	94	58.140	MGP_AJ_G0031801	Zfp61	63	58.140
MGP_AJ_G0034459	Zfp872	86	50.799	MGP_AJ_G0031800	Zfp93	99	50.799
MGP_AJ_G0034459	Zfp872	95	45.552	MGP_AJ_G0031802	Zfp94	96	45.552
MGP_AJ_G0034459	Zfp872	87	56.369	MGP_AJ_G0033747	Zfp709	95	58.900
MGP_AJ_G0034459	Zfp872	99	48.447	MGP_AJ_G0020654	Zfp759	99	46.000
MGP_AJ_G0034459	Zfp872	100	50.368	MGP_AJ_G0020653	Rslcan18	80	47.959