EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AJ_G0034883 (Gene tree)
Gene ID: -
Gene Symbol: Celf6
Alias: 6330569O16Rik|Brunol6
Full Name: CUGBP%2C Elav-like family member 6
Gene Type: protein_coding
Species: Mus_musculus_aj
Status: putative
Strand: Plus strand
Length: 29739 bases
Position: chr9:57041559-57071297
Accession: 1923433
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0092732	RRM_1	PF00076.22	2.1e-51	1	3
MGP_AJ_P0092732	RRM_1	PF00076.22	2.1e-51	2	3
MGP_AJ_P0092732	RRM_1	PF00076.22	2.1e-51	3	3
MGP_AJ_P0092730	RRM_1	PF00076.22	2.6e-51	1	3
MGP_AJ_P0092730	RRM_1	PF00076.22	2.6e-51	2	3
MGP_AJ_P0092730	RRM_1	PF00076.22	2.6e-51	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0092729	-	3056	XM_006511540	MGP_AJ_P0092729	182 (aa)	XP_006511603	Q7TN33
MGP_AJ_T0092734	-	591	-	-	- (aa)	-	-
MGP_AJ_T0092733	-	449	-	-	- (aa)	-	-
MGP_AJ_T0092732	-	2785	-	MGP_AJ_P0092732	460 (aa)	-	-
MGP_AJ_T0092731	-	2893	-	MGP_AJ_P0092731	162 (aa)	-	-
MGP_AJ_T0092730	-	3029	-	MGP_AJ_P0092730	481 (aa)	-	-

Gene Model

Click here to download MGP_AJ_G0034883's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AJ_G0034883's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0034883	Celf6	54	35.802	MGP_AJ_G0017824	Rbms2	50	35.802
MGP_AJ_G0034883	Celf6	75	84.783	MGP_AJ_G0017538	Celf5	93	80.645
MGP_AJ_G0034883	Celf6	52	42.105	MGP_AJ_G0035381	Rbms3	82	42.105
MGP_AJ_G0034883	Celf6	79	31.250	MGP_AJ_G0030704	Hnrnpa2b1	66	32.143
MGP_AJ_G0034883	Celf6	95	35.802	MGP_AJ_G0028539	Elavl4	85	40.741
MGP_AJ_G0034883	Celf6	91	45.567	MGP_AJ_G0025309	Celf2	79	80.952
MGP_AJ_G0034883	Celf6	62	32.955	MGP_AJ_G0030941	Tia1	85	36.000
MGP_AJ_G0034883	Celf6	76	31.959	MGP_AJ_G0025834	-	55	31.959
MGP_AJ_G0034883	Celf6	57	44.444	MGP_AJ_G0033314	Elavl1	97	44.444
MGP_AJ_G0034883	Celf6	77	39.062	MGP_AJ_G0023107	Pabpc6	64	39.062
MGP_AJ_G0034883	Celf6	100	67.200	MGP_AJ_G0024174	Celf4	99	67.066
MGP_AJ_G0034883	Celf6	54	31.818	MGP_AJ_G0033065	Tial1	53	32.143
MGP_AJ_G0034883	Celf6	75	85.526	MGP_AJ_G0027512	Celf3	81	87.368
MGP_AJ_G0034883	Celf6	51	34.483	MGP_AJ_G0036025	Pabpc5	63	34.483
MGP_AJ_G0034883	Celf6	57	42.308	MGP_AJ_G0034452	Elavl3	80	41.975
MGP_AJ_G0034883	Celf6	89	37.037	MGP_AJ_G0028407	Elavl2	78	40.741
MGP_AJ_G0034883	Celf6	66	32.500	MGP_AJ_G0018238	Hnrnpab	65	31.414
MGP_AJ_G0034883	Celf6	91	45.549	MGP_AJ_G0026098	Celf1	98	45.135