EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AJ_G0034923 (Gene tree)
Gene ID: -
Gene Symbol: Rab11a
Alias: Rab11|Rab11A
Full Name: RAB11A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_aj
Status: putative
Strand: Minus strand
Length: 21214 bases
Position: chr9:62240306-62261519
Accession: 1858202
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0092909	MMR_HSR1	PF01926.23	2.3e-07	1	1
MGP_AJ_P0092910	MMR_HSR1	PF01926.23	2.5e-07	1	1
MGP_AJ_P0092908	MMR_HSR1	PF01926.23	5.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0092908	-	651	-	MGP_AJ_P0092908	216 (aa)	-	-
MGP_AJ_T0092909	-	462	-	MGP_AJ_P0092909	153 (aa)	-	-
MGP_AJ_T0092911	-	695	-	-	- (aa)	-	-
MGP_AJ_T0092910	-	595	-	MGP_AJ_P0092910	155 (aa)	-	-
MGP_AJ_T0092904	-	726	-	MGP_AJ_P0092904	86 (aa)	-	P62492
MGP_AJ_T0092905	-	603	-	-	- (aa)	-	-
MGP_AJ_T0092906	-	500	-	MGP_AJ_P0092906	86 (aa)	-	-
MGP_AJ_T0092907	-	397	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_AJ_G0034923's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AJ_G0034923's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0034923	Rab11a	100	96.078	MGP_AJ_G0023494	Rab11b	100	90.367
MGP_AJ_G0034923	Rab11a	68	30.065	MGP_AJ_G0016500	Arl8a	77	30.065
MGP_AJ_G0034923	Rab11a	91	44.604	MGP_AJ_G0032488	Rab30	97	37.981
MGP_AJ_G0034923	Rab11a	81	34.127	MGP_AJ_G0031454	Kras	87	37.725
MGP_AJ_G0034923	Rab11a	88	48.148	MGP_AJ_G0023847	Rab5a	91	41.951
MGP_AJ_G0034923	Rab11a	86	34.586	MGP_AJ_G0029322	Rheb	89	32.927
MGP_AJ_G0034923	Rab11a	89	42.143	MGP_AJ_G0036087	Rab9b	86	41.040
MGP_AJ_G0034923	Rab11a	74	30.303	MGP_AJ_G0019530	Dnajc27	60	30.303
MGP_AJ_G0034923	Rab11a	87	38.686	MGP_AJ_G0030971	Rab7	91	45.833
MGP_AJ_G0034923	Rab11a	91	46.763	MGP_AJ_G0019824	Rab15	93	40.887
MGP_AJ_G0034923	Rab11a	90	43.066	MGP_AJ_G0026926	Rab22a	81	42.038
MGP_AJ_G0034923	Rab11a	81	34.921	MGP_AJ_G0027648	Nras	95	37.931
MGP_AJ_G0034923	Rab11a	91	56.835	MGP_AJ_G0027997	Rab2a	81	54.971
MGP_AJ_G0034923	Rab11a	93	42.254	MGP_AJ_G0023937	Rab31	86	41.071
MGP_AJ_G0034923	Rab11a	89	43.885	MGP_AJ_G0019340	Rab37	77	45.181
MGP_AJ_G0034923	Rab11a	90	43.796	MGP_AJ_G0023946	Rab12	70	37.799
MGP_AJ_G0034923	Rab11a	81	34.921	MGP_AJ_G0033196	Hras	85	37.654
MGP_AJ_G0034923	Rab11a	76	31.667	MGP_AJ_G0019178	Arl4d	58	31.667
MGP_AJ_G0034923	Rab11a	94	35.780	MGP_AJ_G0017327	Rab36	79	35.780
MGP_AJ_G0034923	Rab11a	84	38.281	MGP_AJ_G0032548	Rab6a	84	35.955
MGP_AJ_G0034923	Rab11a	91	56.115	MGP_AJ_G0021251	Rab2b	95	51.366
MGP_AJ_G0034923	Rab11a	94	39.423	MGP_AJ_G0036235	Rab9	97	39.423
MGP_AJ_G0034923	Rab11a	78	31.746	MGP_AJ_G0019665	Arl4a	60	31.746
MGP_AJ_G0034923	Rab11a	100	50.000	MGP_AJ_G0018037	Rab1a	85	52.299
MGP_AJ_G0034923	Rab11a	88	49.630	MGP_AJ_G0019135	Rab5c	90	41.262
MGP_AJ_G0034923	Rab11a	93	41.379	MGP_AJ_G0027158	Rab33b	85	37.799
MGP_AJ_G0034923	Rab11a	88	35.821	MGP_AJ_G0035173	Rab6b	77	35.404
MGP_AJ_G0034923	Rab11a	95	70.748	MGP_AJ_G0027364	Rab25	99	62.150
MGP_AJ_G0034923	Rab11a	79	39.669	MGP_AJ_G0031560	Rasl2-9	70	36.364
MGP_AJ_G0034923	Rab11a	81	31.746	MGP_AJ_G0035150	Mras	85	32.768
MGP_AJ_G0034923	Rab11a	75	40.000	MGP_AJ_G0022200	Rabl2	67	37.908
MGP_AJ_G0034923	Rab11a	97	52.201	MGP_AJ_G0024659	Rab1b	84	55.357
MGP_AJ_G0034923	Rab11a	88	31.293	MGP_AJ_G0030353	Rasl11a	60	31.293
MGP_AJ_G0034923	Rab11a	88	49.265	MGP_AJ_G0035849	Rab39b	82	46.857
MGP_AJ_G0034923	Rab11a	93	48.252	MGP_AJ_G0024094	Rab18	78	47.531
MGP_AJ_G0034923	Rab11a	95	54.110	MGP_AJ_G0025627	Rab14	97	54.422
MGP_AJ_G0034923	Rab11a	92	34.752	MGP_AJ_G0015886	Rab23	80	32.984
MGP_AJ_G0034923	Rab11a	90	40.426	MGP_AJ_G0035677	Rab33a	74	39.665
MGP_AJ_G0034923	Rab11a	90	49.635	MGP_AJ_G0029939	Rab35	99	42.512