EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AJ_G0035049 (Gene tree)
Gene ID: -
Gene Symbol: Ddx43
Alias: ENSMUSG00000070291|OTTMUSG00000019690
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 43
Gene Type: protein_coding
Species: Mus_musculus_aj
Status: putative
Strand: Plus strand
Length: 27645 bases
Position: chr9:76176434-76204078
Accession: 3642857
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0093421	KH_1	PF00013.29	4.5e-12	1	1
MGP_AJ_P0093421	DEAD	PF00270.29	2.6e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0093421	-	2207	-	MGP_AJ_P0093421	646 (aa)	-	D3Z6P9

Gene Model

Click here to download MGP_AJ_G0035049's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AJ_G0035049's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0035049	Ddx43	74	36.270	MGP_AJ_G0019266	Ddx42	50	36.270
MGP_AJ_G0035049	Ddx43	60	34.913	MGP_AJ_G0033682	Ddx49	93	34.897
MGP_AJ_G0035049	Ddx43	64	36.941	MGP_AJ_G0020556	Ddx41	65	37.232
MGP_AJ_G0035049	Ddx43	60	39.012	MGP_AJ_G0016900	D1Pas1	61	39.012
MGP_AJ_G0035049	Ddx43	63	34.135	MGP_AJ_G0018830	Ddx52	69	34.135
MGP_AJ_G0035049	Ddx43	68	44.519	MGP_AJ_G0019281	Ddx5	89	45.040
MGP_AJ_G0035049	Ddx43	63	40.757	MGP_AJ_G0022263	Ddx23	54	40.757
MGP_AJ_G0035049	Ddx43	52	31.563	MGP_AJ_G0022640	Eif4a2	88	32.099
MGP_AJ_G0035049	Ddx43	68	43.527	MGP_AJ_G0022038	Ddx17	67	43.527
MGP_AJ_G0035049	Ddx43	55	34.974	MGP_AJ_G0016395	Ddx18	56	34.974
MGP_AJ_G0035049	Ddx43	57	40.310	MGP_AJ_G0035549	Ddx3x	61	39.259
MGP_AJ_G0035049	Ddx43	60	40.000	MGP_AJ_G0020888	Ddx4	56	40.000
MGP_AJ_G0035049	Ddx43	62	33.580	MGP_AJ_G0016524	Ddx59	64	33.333
MGP_AJ_G0035049	Ddx43	54	30.159	MGP_AJ_G0034055	Ddx28	70	30.423
MGP_AJ_G0035049	Ddx43	54	31.831	MGP_AJ_G0019446	Eif4a3	84	31.831
MGP_AJ_G0035049	Ddx43	59	35.678	MGP_AJ_G0031388	Ddx47	91	34.218
MGP_AJ_G0035049	Ddx43	54	33.799	MGP_AJ_G0017281	Ddx50	57	30.073
MGP_AJ_G0035049	Ddx43	53	32.044	MGP_AJ_G0030065	Ddx55	58	32.044