EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AJ_G0035111 (Gene tree)
Gene ID: -
Gene Symbol: Plod2
Alias: D530025C14Rik|LH2|Plod-2|lysyl hydroxylase 2
Full Name: procollagen lysine%2C 2-oxoglutarate 5-dioxygenase 2
Gene Type: protein_coding
Species: Mus_musculus_aj
Status: putative
Strand: Plus strand
Length: 67611 bases
Position: chr9:90359460-90427070
Accession: 1347007
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0093718	2OG-FeII_Oxy	PF03171.20	1.3e-05	1	1
MGP_AJ_P0093719	2OG-FeII_Oxy	PF03171.20	1.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0093722	-	1276	-	-	- (aa)	-	-
MGP_AJ_T0093720	-	844	-	-	- (aa)	-	-
MGP_AJ_T0093721	-	596	-	-	- (aa)	-	-
MGP_AJ_T0093718	-	3645	-	MGP_AJ_P0093718	737 (aa)	-	Q9R0B9
MGP_AJ_T0093719	-	3659	-	MGP_AJ_P0093719	758 (aa)	-	-

Gene Model

Click here to download MGP_AJ_G0035111's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AJ_G0035111's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0035111	Plod2	95	60.313	MGP_AJ_G0029075	Plod1	99	59.041
MGP_AJ_G0035111	Plod2	95	59.829	MGP_AJ_G0030181	Plod3	100	57.895