EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AJ_G0035121 (Gene tree)
Gene ID: -
Gene Symbol: Xrn1
Alias: Dhm2|exo|mXrn1
Full Name: 5'-3' exoribonuclease 1
Gene Type: protein_coding
Species: Mus_musculus_aj
Status: putative
Strand: Plus strand
Length: 102287 bases
Position: chr9:93740191-93842477
Accession: 891964
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0093769	XRN_N	PF03159.18	3e-96	1	1
MGP_AJ_P0093765	XRN_N	PF03159.18	1.6e-95	1	1
MGP_AJ_P0093764	XRN_N	PF03159.18	1.6e-95	1	1
MGP_AJ_P0093766	XRN_N	PF03159.18	9.2e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0093769	-	3093	-	MGP_AJ_P0093769	969 (aa)	-	-
MGP_AJ_T0093768	-	6235	-	-	- (aa)	-	-
MGP_AJ_T0093770	-	3615	-	-	- (aa)	-	-
MGP_AJ_T0093771	-	844	-	-	- (aa)	-	-
MGP_AJ_T0093772	-	3046	-	-	- (aa)	-	-
MGP_AJ_T0093767	-	3357	-	-	- (aa)	-	-
MGP_AJ_T0093766	-	357	-	MGP_AJ_P0093766	40 (aa)	-	-
MGP_AJ_T0093765	-	10243	-	MGP_AJ_P0093765	1719 (aa)	-	-
MGP_AJ_T0093764	-	5499	XM_006511153	MGP_AJ_P0093764	1723 (aa)	XP_006511216	A0A087WNV6

Gene Model

Click here to download MGP_AJ_G0035121's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AJ_G0035121's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0035121	Xrn1	90	66.667	MGP_AJ_G0026565	Xrn2	71	39.060