EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AJ_G0035381 (Gene tree)
Gene ID: -
Gene Symbol: Rbms3
Alias: 6720477E09Rik|8430436O14Rik
Full Name: RNA binding motif%2C single stranded interacting protein
Gene Type: protein_coding
Species: Mus_musculus_aj
Status: putative
Strand: Minus strand
Length: 1080943 bases
Position: chr9:114749583-115830525
Accession: 2444477
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0095209	RRM_1	PF00076.22	1.6e-32	1	2
MGP_AJ_P0095209	RRM_1	PF00076.22	1.6e-32	2	2
MGP_AJ_P0095206	RRM_1	PF00076.22	1.2e-31	1	2
MGP_AJ_P0095206	RRM_1	PF00076.22	1.2e-31	2	2
MGP_AJ_P0095204	RRM_1	PF00076.22	1.4e-31	1	2
MGP_AJ_P0095204	RRM_1	PF00076.22	1.4e-31	2	2
MGP_AJ_P0095201	RRM_1	PF00076.22	1.5e-31	1	2
MGP_AJ_P0095201	RRM_1	PF00076.22	1.5e-31	2	2
MGP_AJ_P0095205	RRM_1	PF00076.22	1.5e-31	1	2
MGP_AJ_P0095205	RRM_1	PF00076.22	1.5e-31	2	2
MGP_AJ_P0095200	RRM_1	PF00076.22	1.7e-31	1	2
MGP_AJ_P0095200	RRM_1	PF00076.22	1.7e-31	2	2
MGP_AJ_P0095203	RRM_1	PF00076.22	2e-31	1	2
MGP_AJ_P0095203	RRM_1	PF00076.22	2e-31	2	2
MGP_AJ_P0095207	RRM_1	PF00076.22	2.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0095208	-	2027	-	-	- (aa)	-	-
MGP_AJ_T0095209	-	619	-	MGP_AJ_P0095209	206 (aa)	-	-
MGP_AJ_T0095210	-	1438	-	-	- (aa)	-	-
MGP_AJ_T0095202	-	1625	-	MGP_AJ_P0095202	185 (aa)	-	-
MGP_AJ_T0095203	-	2128	-	MGP_AJ_P0095203	463 (aa)	-	-
MGP_AJ_T0095200	-	7905	XM_017313248	MGP_AJ_P0095200	431 (aa)	XP_017168737	Q8BWL5
MGP_AJ_T0095201	-	3314	-	MGP_AJ_P0095201	414 (aa)	-	-
MGP_AJ_T0095206	-	1984	-	MGP_AJ_P0095206	386 (aa)	-	-
MGP_AJ_T0095207	-	585	-	MGP_AJ_P0095207	194 (aa)	-	-
MGP_AJ_T0095204	-	2166	-	MGP_AJ_P0095204	402 (aa)	-	-
MGP_AJ_T0095205	-	2236	-	MGP_AJ_P0095205	415 (aa)	-	-
MGP_AJ_T0095211	-	1753	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_AJ_G0035381's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AJ_G0035381's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0035381	Rbms3	75	37.079	MGP_AJ_G0025309	Celf2	77	39.474
MGP_AJ_G0035381	Rbms3	77	30.818	MGP_AJ_G0026800	Pabpc1l	59	30.818
MGP_AJ_G0035381	Rbms3	76	39.474	MGP_AJ_G0027512	Celf3	91	39.474
MGP_AJ_G0035381	Rbms3	83	37.222	MGP_AJ_G0028407	Elavl2	69	37.209
MGP_AJ_G0035381	Rbms3	82	42.105	MGP_AJ_G0034883	Celf6	52	42.105
MGP_AJ_G0035381	Rbms3	83	37.097	MGP_AJ_G0028539	Elavl4	70	36.458
MGP_AJ_G0035381	Rbms3	97	34.356	MGP_AJ_G0033314	Elavl1	91	34.356
MGP_AJ_G0035381	Rbms3	93	36.134	MGP_AJ_G0017538	Celf5	57	42.105
MGP_AJ_G0035381	Rbms3	99	80.841	MGP_AJ_G0025740	Rbms1	96	71.538
MGP_AJ_G0035381	Rbms3	68	43.421	MGP_AJ_G0026098	Celf1	53	43.421
MGP_AJ_G0035381	Rbms3	77	33.708	MGP_AJ_G0023107	Pabpc6	59	34.091
MGP_AJ_G0035381	Rbms3	70	38.562	MGP_AJ_G0034452	Elavl3	63	37.931
MGP_AJ_G0035381	Rbms3	83	80.663	MGP_AJ_G0017824	Rbms2	86	66.758
MGP_AJ_G0035381	Rbms3	72	40.789	MGP_AJ_G0024174	Celf4	68	40.789