EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AJ_G0035518 (Gene tree)
Gene ID: -
Gene Symbol: Rbm3
Alias: 2600016C11Rik
Full Name: RNA binding motif protein 3
Gene Type: protein_coding
Species: Mus_musculus_aj
Status: putative
Strand: Minus strand
Length: 6437 bases
Position: chrX:2761105-2767541
Accession: 1099460
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AJ_P0095679	RRM_1	PF00076.22	1.8e-24	1	1
MGP_AJ_P0095678	RRM_1	PF00076.22	1.8e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AJ_T0095679	-	969	-	MGP_AJ_P0095679	153 (aa)	-	-
MGP_AJ_T0095678	-	2792	-	MGP_AJ_P0095678	154 (aa)	-	-
MGP_AJ_T0095682	-	721	-	-	- (aa)	-	-
MGP_AJ_T0095680	-	1055	-	MGP_AJ_P0095680	90 (aa)	-	-
MGP_AJ_T0095681	-	1208	-	-	- (aa)	-	-
MGP_AJ_T0095677	-	2234	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_AJ_G0035518's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AJ_G0035518's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AJ_G0035518	Rbm3	80	36.709	MGP_AJ_G0029746	Hnrnpd	70	34.667
MGP_AJ_G0035518	Rbm3	100	63.529	MGP_AJ_G0017464	Cirbp	99	60.588
MGP_AJ_G0035518	Rbm3	73	33.333	MGP_AJ_G0030062	Snrnp35	55	34.848
MGP_AJ_G0035518	Rbm3	90	39.326	MGP_AJ_G0017470	Dazap1	78	46.032
MGP_AJ_G0035518	Rbm3	78	55.714	MGP_AJ_G0035731	Rbmx	79	56.790
MGP_AJ_G0035518	Rbm3	82	43.243	MGP_AJ_G0018892	Msi2	61	42.857
MGP_AJ_G0035518	Rbm3	82	38.710	MGP_AJ_G0028407	Elavl2	63	32.911
MGP_AJ_G0035518	Rbm3	82	38.710	MGP_AJ_G0028539	Elavl4	58	31.646
MGP_AJ_G0035518	Rbm3	90	35.385	MGP_AJ_G0027150	Pabpc4l	83	34.286
MGP_AJ_G0035518	Rbm3	99	35.955	MGP_AJ_G0030941	Tia1	70	41.333